RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 USP3Q9Y6I4 520 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 PLD2O14939 933 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 SCAMP1O15126 338 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 MUSKO15146 869 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 SLC31A1O15431 190 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 SLC26A4O43511 780 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 TBL1XO60907 577 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 KIF20AO95235 890 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 VNN1O95497 513 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ADH1BP00325 375 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ALPPL2P10696 532 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 IDEP14735 1019 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 COL8A1P27658 744 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 SLC6A4P31645 630 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 UGT1A5P35504 534 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 CYP2J2P51589 502 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ANAPC15P60006 121 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 CRYBG2Q8N1P7 616 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 FAM131CQ96AQ9 280 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 PRICKLE1Q96MT3 831 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-206ENST00000558739 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
SMAD3-206ENST00000558739 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-206ENST00000558739 DNAJC28Q9NX36 388 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 FOXJ2Q9P0K8 574 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 STIM2Q9P246 746 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 PCDHGA7Q9Y5G6 932 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
SMAD3-206ENST00000558739 TRPM6Q9BX84 2022 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PCNX1Q96RV3 2341 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 FRMD3A2A2Y4 597 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PRAMEF26H0Y7S4 382 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
SMAD3-206ENST00000558739 LIPCP11150 499 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 C5AR1P21730 350 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ATICP31939 592 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ASPAP45381 313 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PSEN1P49768 467 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 POLE2P56282 527 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 TAS2R38P59533 333 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ST8SIA6P61647 398 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 CNTN1Q12860 1018 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 KCNAB2Q13303 367 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 BIRC3Q13489 604 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 DEFB133Q30KQ1 61 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
SMAD3-206ENST00000558739 FSCBQ5H9T9 825 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 MANEAQ5SRI9 462 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 BHLHA9Q7RTU4 235 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 TRIM69Q86WT6 500 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 MIB2Q96AX9 1013 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PPP1R13BQ96KQ4 1090 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 RPL10LQ96L21 214 aaKnown RBP12.3□□□□□ -0.44
SMAD3-206ENST00000558739 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 EPB41L5Q9HCM4 733 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 SFMBT1Q9UHJ3 866 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 KLF15Q9UIH9 416 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ACSL6Q9UKU0 697 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 ERVW-1Q9UQF0 538 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 DMTF1Q9Y222 760 aa12.3□□□□□ -0.44
SMAD3-206ENST00000558739 PRAMEF33A0A0G2JMD5 474 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 EDDM13A0A1B0GTR0 161 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 CLIC2O15247 247 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 MTSS1O43312 755 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 PRAMEF10O60809 474 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 TCEA3O75764 348 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 ITIH1P19827 911 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 GJB2P29033 226 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 HARS2P49590 506 aaKnown RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 HMGN5P82970 282 aaKnown RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 NCOA4Q13772 614 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 SETMARQ53H47 684 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 ZCCHC8Q6NZY4 707 aaKnown RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 GCNT7Q6ZNI0 430 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 JPH3Q8WXH2 748 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 CYFIP2Q96F07 1278 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 CDK5RAP1Q96SZ6 601 aaKnown RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF768Q9H5H4 540 aaKnown RBP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 PNPLA8Q9NP80 782 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms