RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MLLT3P42568 568 aaPredicted RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 ASPAP45381 313 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PSMD8P48556 350 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 TKTL1P51854 596 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ADPRHP54922 357 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 CEBPZQ03701 1054 aaKnown RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 CCDC15Q0P6D6 951 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SLC39A14Q15043 492 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ISXQ2M1V0 245 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ZSCAN23Q3MJ62 389 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SETMARQ53H47 684 aaPredicted RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 RAB41Q5JT25 222 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PIK3R6Q5UE93 754 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 FAM46CQ5VWP2 391 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 RNF219Q5W0B1 726 aaPredicted RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 BSPRYQ5W0U4 402 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SPOPLQ6IQ16 392 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 CNNM4Q6P4Q7 775 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 USP53Q70EK8 1073 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SV2AQ7L0J3 742 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PIGZQ86VD9 579 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SLC9A9Q8IVB4 645 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MFN1Q8IWA4 741 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ZC3H3Q8IXZ2 948 aaKnown RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 STK40Q8N2I9 435 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ARL14Q8N4G2 192 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 AADATQ8N5Z0 425 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 EXD3Q8N9H8 876 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 IQUBQ8NA54 791 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ANKRD52Q8NB46 1076 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 FAM174AQ8TBP5 190 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MAPK15Q8TD08 544 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 AZIN2Q96A70 460 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MYO19Q96H55 970 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 TWNKQ96RR1 684 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 CCNL2Q96S94 520 aaPredicted RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 LRRC4Q9HBW1 653 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ASCL3Q9NQ33 180 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ABCC13Q9NSE7 274 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ARHGAP20Q9P2F6 1191 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SERGEFQ9UGK8 458 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SFMBT1Q9UHJ3 866 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 CYTH4Q9UIA0 394 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SATB2Q9UPW6 733 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 ERVW-1Q9UQF0 538 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 FRMD4BQ9Y2L6 1034 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 CEP83Q9Y592 693 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PCDHB3Q9Y5E6 796 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PCDHGA8Q9Y5G5 932 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MORC2Q9Y6X9 1032 aaPredicted RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 AHCTF1Q8WYP5 2266 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MAST4O15021 2626 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 A0A087X0B3 334 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 GOLGA6L7A0A1B0GV03 622 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 A0A1B0GVM2 712 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PVALEFA0A1B0GWK0 134 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 VPS37CA5D8V6 355 aaPredicted RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 TTC34A8MYJ7 566 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 TERTO14746 1132 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 SCAMP1O15126 338 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 FFAR2O15552 330 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 SUV39H1O43463 412 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ACSL4O60488 711 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PIAS2O75928 621 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 AFPP02771 609 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 THEGLP0DJG4 465 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 KRT10P13645 584 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PDIA4P13667 645 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 ZNF18P17022 549 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 CD58P19256 250 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 DLG4P78352 724 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NUCB2P80303 420 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 SKOR1P84550 965 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ECT2LQ008S8 904 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 SULT2A1Q06520 285 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 KCNMA1Q12791 1236 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 CDH18Q13634 790 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ELAVL3Q14576 367 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 ZNF394Q53GI3 561 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 C3orf38Q5JPI3 329 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PITRM1Q5JRX3 1037 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NUGGCQ68CJ6 796 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ARHGAP17Q68EM7 881 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NEK5Q6P3R8 708 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 RFWD3Q6PCD5 774 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 DSG4Q86SJ6 1040 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 TRIM69Q86WT6 500 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 DCP2Q8IU60 420 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 CARNMT1Q8N4J0 409 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 HJURPQ8NCD3 748 aaPredicted RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 WDR36Q8NI36 951 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 IFI44Q8TCB0 444 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 WFDC5Q8TCV5 224 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 TMEM174Q8WUU8 243 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NDRG1Q92597 394 aaKnown RBP5.36□□□□□ -1.55
SPG11-208ENST00000558155 EDEM1Q92611 657 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PTPRN2Q92932 1015 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms