RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 FNIP2Q9P278 1114 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 ADAM28Q9UKQ2 775 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 GIT1Q9Y2X7 761 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 SH3BP1Q9Y3L3 701 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 CYP46A1Q9Y6A2 500 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 NUP210Q8TEM1 1887 aaPredicted RBP6.62□□□□□ -1.35
CLPX-202ENST00000558103 TSC2P49815 1807 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 ZFHX4Q86UP3 3567 aa6.62□□□□□ -1.35
CLPX-202ENST00000558103 EP300Q09472 2414 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 A0A1B0GUA9 196 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 A0A1W2PR48 441 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 B4GALT5O43286 388 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CDKL5O76039 1030 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CTDNEP1O95476 244 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 LPLP06858 475 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 SPATA31D3P0C874 917 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 MYBP10242 640 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 GLULP15104 373 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ENPP1P22413 925 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 GLRA2P23416 452 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 AKAP5P24588 427 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ARL2P36404 184 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 RARRES1P49788 294 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 LGALS4P56470 323 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 TMPRSS15P98073 1019 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 MGAT5Q09328 741 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 TFDP1Q14186 410 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 PUM1Q14671 1186 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLPX-202ENST00000558103 NAB2Q15742 525 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 SLC27A1Q6PCB7 646 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 SPATA31D4Q6ZUB0 917 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 GET4Q7L5D6 327 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 SPRED1Q7Z699 444 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CDR2LQ86X02 465 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 PALB2Q86YC2 1186 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CMIPQ8IY22 773 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ZNF808Q8N4W9 903 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 FGF14Q92915 247 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 EIF2AK1Q9BQI3 630 aaKnown RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 PAAF1Q9BRP4 392 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 APOL6Q9BWW8 343 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 FAM126AQ9BYI3 521 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 TRIM6Q9C030 488 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ARHGEF3Q9NR81 526 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 SLC2A4RGQ9NR83 387 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ANKEF1Q9NU02 776 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CACNG4Q9UBN1 327 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 FBXW11Q9UKB1 542 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 CA14Q9ULX7 337 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 ATP8A1Q9Y2Q0 1164 aa6.61□□□□□ -1.35
CLPX-202ENST00000558103 KIF26AQ9ULI4 1882 aaPredicted RBP6.61□□□□□ -1.35
CLPX-202ENST00000558103 DENND4CQ5VZ89 1909 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 SF3B1O75533 1304 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLPX-202ENST00000558103 PTGESO14684 152 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 PFKFB2O60825 505 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 DTNBO60941 627 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 LMNAP02545 664 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 S100BP04271 92 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 FDPSP14324 419 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 XBP1P17861 261 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 STARD6P59095 220 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 CREMQ03060 361 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 SPDYAQ5MJ70 313 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 PRSS55Q6UWB4 352 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 GLB1L2Q8IW92 636 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 TPH2Q8IWU9 490 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 HACE1Q8IYU2 909 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 MAML2Q8IZL2 1156 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 PJA1Q8NG27 643 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 LNX1Q8TBB1 728 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 RAX2Q96IS3 184 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 CLSTN3Q9BQT9 956 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 RPP25Q9BUL9 199 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 DDX23Q9BUQ8 820 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 COLEC11Q9BWP8 271 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 POLR3FQ9H1D9 316 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 PDRG1Q9NUG6 133 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 DDX56Q9NY93 547 aaKnown RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 NCDNQ9UBB6 729 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 TPCN1Q9ULQ1 816 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 PCDHA12Q9UN75 941 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 ZFP37Q9Y6Q3 630 aaPredicted RBP6.6□□□□□ -1.35
CLPX-202ENST00000558103 R4GN57 208 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 RALGAPA1Q6GYQ0 2036 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 CEP250Q9BV73 2442 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 LAMA1P25391 3075 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 OBSL1O75147 1896 aa6.6□□□□□ -1.35
CLPX-202ENST00000558103 WDFY3Q8IZQ1 3526 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 CASTOR2A6NHX0 329 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 MARCH6O60337 910 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 USO1O60763 962 aaKnown RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 BAG4O95429 457 aaKnown RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 EDN1P05305 212 aa6.59□□□□□ -1.35
CLPX-202ENST00000558103 DCNP07585 359 aaKnown RBP6.59□□□□□ -1.35
CLPX-202ENST00000558103 POU2F2P09086 479 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms