RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SPAG5Q96R06 1193 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 TBCBQ99426 244 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 FUCA2Q9BTY2 467 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 EDEM2Q9BV94 578 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 NAT10Q9H0A0 1025 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 SUN2Q9UH99 717 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 SLCO3A1Q9UIG8 710 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 STAP1Q9ULZ2 295 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 ERVW-1Q9UQF0 538 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 NYNRINQ9P2P1 1898 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 CHD5Q8TDI0 1954 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 CHD8Q9HCK8 2581 aa9.06□□□□□ -0.96
SNRPA1-206ENST00000558059 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 A0A1B0GVM2 712 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 TCAF2A6NFQ2 919 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 C4orf47A7E2U8 309 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 NDUFS2O75306 463 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 ENDOD1O94919 500 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 MOCS3O95396 460 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 F9P00740 461 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SRPRAP08240 638 aaKnown RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 PDGFRAP16234 1089 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 MZF1P28698 734 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 OXTRP30559 389 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 DPP6P42658 865 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 RPS14P62263 151 aaKnown RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 ECT2LQ008S8 904 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 DEUP1Q05D60 604 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC12A1Q13621 1099 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 DUOXA1Q1HG43 343 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 HNRNPA1L2Q32P51 320 aaKnown RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 RABGAP1LQ5R372 815 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 C9orf64Q5T6V5 341 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 TTC39BQ5VTQ0 682 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC23A3Q6PIS1 610 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 TRIM72Q6ZMU5 477 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 PHLDB2Q86SQ0 1253 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 CACUL1Q86Y37 369 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 EMC1Q8N766 993 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 MSANTD4Q8NCY6 345 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 OR52K2Q8NGK3 314 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC30A5Q8TAD4 765 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 DNASE2BQ8WZ79 361 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 PCMTD1Q96MG8 357 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 RPRD1AQ96P16 312 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 NUP58Q9BVL2 599 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 GPR174Q9BXC1 333 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 TKTL2Q9H0I9 626 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SIK2Q9H0K1 926 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 RSPH9Q9H1X1 276 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 WDCPQ9H6R7 721 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 CAPN10Q9HC96 672 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 OR51B4Q9Y5P0 310 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 SNX10Q9Y5X0 201 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 TARSL2A2RTX5 802 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 DRGXA6NNA5 263 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 SMTNL1A8MU46 457 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 METTL12A8MUP2 240 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 TTC34A8MYJ7 566 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 SIN3BO75182 1162 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CLDN11O75508 207 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CNTN5O94779 1100 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 GJB6O95452 261 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 SERPINF2P08697 491 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ACADMP11310 421 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 MAOBP27338 520 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ACSL1P33121 698 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 NUMBP49757 651 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 STK19P49842 368 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF165P49910 485 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ST8SIA6P61647 398 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF177Q13360 481 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 IQCB1Q15051 598 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CLEC16AQ2KHT3 1053 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 RAB6CQ53S08 254 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 ALFQ53S48 1182 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 SND1Q7KZF4 910 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 IRF2BP2Q7Z5L9 587 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 PHF13Q86YI8 300 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CADM4Q8NFZ8 388 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CEP76Q8TAP6 659 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 RXFP2Q8WXD0 754 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 BAP1Q92560 729 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 FOXJ1Q92949 421 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 RPL10LQ96L21 214 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 C1orf74Q96LT6 269 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 CFAP57Q96MR6 1250 aa9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 NAP1L5Q96NT1 182 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-206ENST00000558059 FAM129BQ96TA1 746 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms