RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FBXL22Q6P050 247 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 NCEH1Q6PIU2 408 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 SLC26A9Q7LBE3 791 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 STK40Q8N2I9 435 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 PPP1R9BQ96SB3 815 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 NEUROG2Q9H2A3 272 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 PDCL3Q9H2J4 239 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
SHMT2-235ENST00000557740 KNL1Q8NG31 2342 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 CHD6Q8TD26 2715 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
SHMT2-235ENST00000557740 IGHV4-34P06331 123 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 PNMA6AP0CW24 399 aaPredicted RBP15.08■□□□□ 0
SHMT2-235ENST00000557740 MZF1P28698 734 aaPredicted RBP15.08■□□□□ 0
SHMT2-235ENST00000557740 GALCP54803 685 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 RACK1P63244 317 aaKnown RBP15.08■□□□□ 0
SHMT2-235ENST00000557740 SLC6A3Q01959 620 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 INAVAQ3KP66 663 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 DPCR1Q3MIW9 517 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 PTPN20Q4JDL3 420 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 GLRX5Q86SX6 157 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 ZDHHC17Q8IUH5 632 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 PNPLA1Q8N8W4 532 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 OR2T34Q8NGX1 318 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 RHBDD1Q8TEB9 315 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 ADAMTS14Q8WXS8 1223 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 IGSF8Q969P0 613 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 SKA1Q96BD8 255 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 CDC6Q99741 560 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 TUBGCP2Q9BSJ2 902 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 ACE2Q9BYF1 805 aaPredicted RBP15.08■□□□□ 0
SHMT2-235ENST00000557740 PLCB1Q9NQ66 1216 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 ADAMTS1Q9UHI8 967 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 SLC25A13Q9UJS0 675 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 VANGL2Q9ULK5 521 aa15.08■□□□□ 0
SHMT2-235ENST00000557740 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 A0A1W2PPC4 97 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 M0QYT0 321 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 IL1BP01584 269 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 GOT1P17174 413 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 C5AR1P21730 350 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 ERCC5P28715 1186 aaPredicted RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 NOS2P35228 1153 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 CLCN1P35523 988 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 GGCXP38435 758 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 ZNF177Q13360 481 aaPredicted RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 AUHQ13825 339 aaKnown RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 VWA3BQ502W6 1294 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 HSP90AA4PQ58FG1 418 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 CXorf57Q6NSI4 855 aaKnown RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 SND1Q7KZF4 910 aaKnown RBP eCLIP15.07■□□□□ 0
SHMT2-235ENST00000557740 DSG4Q86SJ6 1040 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 AADATQ8N5Z0 425 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 TMEM35BQ8NCS4 154 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 OR14C36Q8NHC7 312 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 SLC6A18Q96N87 628 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 SPAG5Q96R06 1193 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 FAM129BQ96TA1 746 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 NUP62CLQ9H1M0 184 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 AASDHPPTQ9NRN7 309 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 RRN3Q9NYV6 651 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 VPS28Q9UK41 221 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 TPX2Q9ULW0 747 aaKnown RBP15.07■□□□□ 0
SHMT2-235ENST00000557740 STAP1Q9ULZ2 295 aa15.07■□□□□ 0
SHMT2-235ENST00000557740 H0Y8X5 98 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 PAGE1O75459 146 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 CLDN11O75508 207 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 VAV1P15498 845 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 CTSKP43235 329 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 GRK6P43250 576 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 SULT1E1P49888 294 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 CCR5P51681 352 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 PLK1P53350 603 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 ADPRHP54922 357 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 RNASE9P60153 205 aaKnown RBP15.06■□□□□ 0
SHMT2-235ENST00000557740 DRAP1Q14919 205 aaPredicted RBP15.06■□□□□ 0
SHMT2-235ENST00000557740 ACCSLQ4AC99 568 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 MIIPQ5JXC2 388 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 ZNF397Q8NF99 534 aaPredicted RBP15.06■□□□□ 0
SHMT2-235ENST00000557740 BAHD1Q8TBE0 780 aaPredicted RBP15.06■□□□□ 0
SHMT2-235ENST00000557740 OR8D1Q8WZ84 308 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 PTPRN2Q92932 1015 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 ORAI3Q9BRQ5 295 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 SIK2Q9H0K1 926 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-235ENST00000557740 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 HS3ST4Q9Y661 456 aa15.06■□□□□ 0
SHMT2-235ENST00000557740 FAM208BQ5VWN6 2430 aa15.05■□□□□ 0
SHMT2-235ENST00000557740 FAM221BA6H8Z2 402 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 KCNK3O14649 394 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 VILLO15195 856 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 PCDHGA12O60330 932 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 DFNA5O60443 496 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 IRAK1P51617 712 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 CDH4P55283 916 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 IL9RQ01113 521 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 KCNJ12Q14500 433 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 KCNT1Q5JUK3 1230 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms