RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TBC1D3EA0A087X179 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3KA0A087X1G2 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3FA6NER0 549 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 EIF4E1BA6NMX2 242 aaKnown RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 C10orf142B7Z368 130 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3LB9A6J9 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3HP0C7X1 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 ECT2LQ008S8 904 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 CENPCQ03188 943 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TARDBPQ13148 414 aaKnown RBP eCLIP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TAF5Q15542 800 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 INAVAQ3KP66 663 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 RNF219Q5W0B1 726 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3GQ6DHY5 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3CQ6IPX1 549 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 SND1Q7KZF4 910 aaKnown RBP eCLIP14.55□□□□□ -0.081e-12■■□□□ 11.5
SLIRP-210ENST00000557431 TMPRSS12Q86WS5 348 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 TBC1D3Q8IZP1 549 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 ENGASEQ8NFI3 743 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 OR52K2Q8NGK3 314 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 KLK6Q92876 244 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 AZIN2Q96A70 460 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 HSFY1Q96LI6 401 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 DDX50Q9BQ39 737 aaKnown RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 SCAND2PQ9GZW5 306 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-210ENST00000557431 GDF3Q9NR23 364 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 SARDHQ9UL12 918 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 KIAA1257Q9ULG3 409 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 SCML1Q9UN30 329 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 AK5Q9Y6K8 562 aa14.55□□□□□ -0.08
SLIRP-210ENST00000557431 LRRK1Q38SD2 2015 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 TARSL2A2RTX5 802 aaKnown RBP14.54□□□□□ -0.08
SLIRP-210ENST00000557431 E5RJQ4 531 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 CAPN9O14815 690 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 BNIP3LO60238 219 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 FBXO21O94952 628 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 MOCS3O95396 460 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 TRUB2O95900 331 aaKnown RBP14.54□□□□□ -0.08
SLIRP-210ENST00000557431 APOEP02649 317 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 SRPRAP08240 638 aaKnown RBP14.54□□□□□ -0.08
SLIRP-210ENST00000557431 KRT5P13647 590 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 GOT1P17174 413 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 EIF2S3P41091 472 aaKnown RBP14.54□□□□□ -0.08
SLIRP-210ENST00000557431 GPD2P43304 727 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 CCR5P51681 352 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 NXPH1P58417 271 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 CCDC117Q8IWD4 279 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-210ENST00000557431 SMARCE1Q969G3 411 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 NXPE2Q96DL1 559 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 RMND1Q9NWS8 449 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 FZD4Q9ULV1 537 aa14.54□□□□□ -0.08
SLIRP-210ENST00000557431 FAM170AA1A519 330 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 TLR4O00206 839 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 ADH1BP00325 375 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 C5AR1P21730 350 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 HNF1BP35680 557 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 STX17P56962 302 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 LRRC63Q05C16 580 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 COBLL1Q53SF7 1204 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 C6orf118Q5T5N4 469 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 FBXL19Q6PCT2 694 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 GJB7Q6PEY0 223 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 KANSL1Q7Z3B3 1105 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
SLIRP-210ENST00000557431 ZNF557Q8N988 423 aaPredicted RBP14.53□□□□□ -0.08
SLIRP-210ENST00000557431 TSC1Q92574 1164 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 METTL14Q9HCE5 456 aaKnown RBP14.53□□□□□ -0.08
SLIRP-210ENST00000557431 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 CTNND2Q9UQB3 1225 aa14.53□□□□□ -0.08
SLIRP-210ENST00000557431 F5H5T6 163 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 RNF103O00237 685 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 DFNA5O60443 496 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 GRAP2O75791 330 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 C1QL1O75973 258 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 LETM1O95202 739 aaPredicted RBP14.52□□□□□ -0.09
SLIRP-210ENST00000557431 MYF5P13349 255 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 NUCB2P80303 420 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 APBA1Q02410 837 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 CNTN1Q12860 1018 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 NNTQ13423 1086 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 ARID5BQ14865 1188 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 STILQ15468 1287 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 ACCSLQ4AC99 568 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 SFMBT2Q5VUG0 894 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 NAPEPLDQ6IQ20 393 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 CXorf57Q6NSI4 855 aaKnown RBP14.52□□□□□ -0.09
SLIRP-210ENST00000557431 Q6ZVU0 165 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 FRS2Q8WU20 508 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 SKA1Q96BD8 255 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 GSDMAQ96QA5 445 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 PRMT1Q99873 361 aaKnown RBP14.52□□□□□ -0.09
SLIRP-210ENST00000557431 IRX2Q9BZI1 471 aaPredicted RBP14.52□□□□□ -0.09
SLIRP-210ENST00000557431 FZD3Q9NPG1 666 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 MAN1B1Q9UKM7 699 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 PCDHGA1Q9Y5H4 931 aa14.52□□□□□ -0.09
SLIRP-210ENST00000557431 GCN1Q92616 2671 aaKnown RBP14.51□□□□□ -0.09
SLIRP-210ENST00000557431 CHD5Q8TDI0 1954 aa14.51□□□□□ -0.09
SLIRP-210ENST00000557431 THAP12O43422 761 aa14.51□□□□□ -0.09
SLIRP-210ENST00000557431 LATO43561 262 aa14.51□□□□□ -0.09
SLIRP-210ENST00000557431 IGLV3-25P01717 112 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms