RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 H0Y8X5 98 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 SLC28A2O43868 658 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 BRINP1O60477 761 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 FAM200BP0CF97 657 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 STAT1P42224 750 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 IL12RB1P42701 662 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 SLC5A3P53794 718 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 IL9RQ01113 521 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 CETN1Q12798 172 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 FUT11Q495W5 492 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 PREPLQ4J6C6 727 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 PKDCCQ504Y2 493 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 PPP1R26Q5T8A7 1209 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 BTBD8Q5XKL5 378 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 SDE2Q6IQ49 451 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 PDCL3Q9H2J4 239 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 CPNE5Q9HCH3 593 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 IGSF5Q9NSI5 407 aa13.01□□□□□ -0.33
SHMT2-230ENST00000557427 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-230ENST00000557427 BTNL10A8MVZ5 291 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 PGFP49763 221 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 CSRP3P50461 194 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 TPMTP51580 245 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 RAD23BP54727 409 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 RHDQ02161 417 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 DNAJC3Q13217 504 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 ANO4Q32M45 955 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 HECTD3Q5T447 861 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 CLEC20AQ6ZU45 233 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 LMO3Q8TAP4 145 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 GOLGA1Q92805 767 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 OTUB2Q96DC9 234 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 CCSER2Q9H7U1 834 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
SHMT2-230ENST00000557427 COMMD8Q9NX08 183 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 IL37Q9NZH6 218 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 APEX2Q9UBZ4 518 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 FTSJ1Q9UET6 329 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
SHMT2-230ENST00000557427 NENFQ9UMX5 172 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 TFR2Q9UP52 801 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 COQ4Q9Y3A0 265 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 PCDHGA1Q9Y5H4 931 aa13□□□□□ -0.33
SHMT2-230ENST00000557427 UBR5O95071 2799 aaPredicted RBP13□□□□□ -0.33
SHMT2-230ENST00000557427 A0A087X0T9 212 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 COCHO43405 550 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 CISD3P0C7P0 127 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 FAM228BP0C875 321 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 H2AFXP16104 143 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-230ENST00000557427 PRLRP16471 622 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
SHMT2-230ENST00000557427 HNF1BP35680 557 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 SOX5P35711 763 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 AFF3P51826 1226 aaKnown RBP12.99□□□□□ -0.33
SHMT2-230ENST00000557427 CUL2Q13617 745 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 HES3Q5TGS1 186 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 GRAMD4Q6IC98 578 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 GPRIN1Q7Z2K8 1008 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 VPS36Q86VN1 386 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 TTC39CQ8N584 583 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 PDZD8Q8NEN9 1154 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 IGSF8Q969P0 613 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 DUSP16Q9BY84 665 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 NACA2Q9H009 215 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 FBXO44Q9H4M3 255 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 CSNK1G1Q9HCP0 422 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
SHMT2-230ENST00000557427 NUMA1Q14980 2115 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 MACROD2A1Z1Q3 448 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 HHLA1C9JL84 531 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 F8VZ95 297 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 GFRA2O00451 464 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 ENC1O14682 589 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-230ENST00000557427 CACNG3O60359 315 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 GREM1O60565 184 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 TBX18O95935 607 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 IGLV3-19P01714 112 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 ATP1A1P05023 1023 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms