RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PCDHGA12O60330 932 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 PROCP04070 461 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 PFKFB1P16118 471 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 PRKCHP24723 683 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
VRK1-206ENST00000557222 GRIA4P48058 902 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 TKTL1P51854 596 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 RAD23BP54727 409 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 BNC1Q01954 994 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 ADGRF1Q5T601 910 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 TMEM215Q68D42 235 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 PIGZQ86VD9 579 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 FBXL13Q8NEE6 735 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 IGSF8Q969P0 613 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 AZIN2Q96A70 460 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 TMA16Q96EY4 203 aaKnown RBP9.03□□□□□ -0.96
VRK1-206ENST00000557222 TRIM11Q96F44 468 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 LHX5Q9H2C1 402 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 SGK2Q9HBY8 427 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 CISHQ9NSE2 258 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 ABCC13Q9NSE7 274 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 SUN2Q9UH99 717 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 EIF2B4Q9UI10 523 aaKnown RBP9.03□□□□□ -0.96
VRK1-206ENST00000557222 KIAA1257Q9ULG3 409 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 TPX2Q9ULW0 747 aaKnown RBP9.03□□□□□ -0.96
VRK1-206ENST00000557222 ADAMTS20P59510 1910 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 PLXNB3Q9ULL4 1909 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 NUMA1Q14980 2115 aa9.02□□□□□ -0.96
VRK1-206ENST00000557222 KALRNO60229 2985 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 A0A1B0GVL5 298 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 IRAK2O43187 625 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 TNFSF14O43557 240 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 TSPAN3O60637 253 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 ATP5BP06576 529 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 HMBSP08397 361 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 TRIM49P0CI25 452 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 TRIM49CP0CI26 452 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 CDK4P11802 303 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 CD27P26842 260 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 HLA-FP30511 346 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 ADH7P40394 386 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 GRK6P43250 576 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 SYKP43405 635 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 MXI1P50539 228 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 BCAT1P54687 386 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 BST2Q10589 180 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 INAVAQ3KP66 663 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 ZCWPW2Q504Y3 356 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 ZNF394Q53GI3 561 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 USP30Q70CQ3 517 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 UNC45BQ8IWX7 931 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 AHI1Q8N157 1196 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 PNPLA1Q8N8W4 532 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 KDM1BQ8NB78 822 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 RNF139Q8WU17 664 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 KCTD13Q8WZ19 329 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 CCDC34Q96HJ3 373 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 BTBD1Q9H0C5 482 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 LRRC4Q9HBW1 653 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 CLEC4EQ9ULY5 219 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 FNDC3AQ9Y2H6 1198 aaKnown RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.02□□□□□ -0.97
VRK1-206ENST00000557222 COQ4Q9Y3A0 265 aa9.02□□□□□ -0.97
VRK1-206ENST00000557222 FLNBO75369 2602 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 PTPRBP23467 1997 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 A0A1B0GVT2 93 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 CETN3O15182 167 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 SEMA4FO95754 770 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 DNTTP04053 509 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 SETSIPP0DME0 302 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 EPB41P11171 864 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 PABPC1P11940 636 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 ACSL1P33121 698 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 CSNK1EP49674 416 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 KIF19Q2TAC6 998 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 FOXD4L6Q3SYB3 417 aaPredicted RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 TTC31Q49AM3 519 aaPredicted RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 FNDC3BQ53EP0 1204 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 SGO2Q562F6 1265 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 BSPRYQ5W0U4 402 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 MSANTD2Q6P1R3 559 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 FOXD4L3Q6VB84 417 aaPredicted RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 CHST9Q7L1S5 443 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 ADIPOR2Q86V24 386 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 HSCBQ8IWL3 235 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 FOXD4L4Q8WXT5 416 aaPredicted RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 SORCS1Q8WY21 1168 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 IRGQQ8WZA9 623 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 SKA1Q96BD8 255 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms