RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	CIPC	Q9C0C6	399 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLC6A17	Q9H1V8	727 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZWILCH	Q9H900	591 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	GRPEL1	Q9HAV7	217 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	ELOVL2	Q9NXB9	296 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	CTTNBP2NL	Q9P2B4	639 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF212	Q9UDV6	495 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	ANAPC7	Q9UJX3	599 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	NEU3	Q9UQ49	428 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	INVS	Q9Y283	1065 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLC27A6	Q9Y2P4	619 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	STARD13	Q9Y3M8	1113 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	HYOU1	Q9Y4L1	999 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	PCDHA13	Q9Y5I0	950 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	ACTL7A	Q9Y615	435 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	EPN1	Q9Y6I3	576 aa	Predicted RBP	9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	DUSP10	Q9Y6W6	482 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778		R4GN57	208 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	MYO10	Q9HD67	2058 aa		9.08	□□□□□ -0.96
PRKCH-222	ENST00000556778	IGLV3-10	A0A075B6K4	115 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778		A0A1W2PQF6	199 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CREB3	O43889	395 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	LRIG2	O94898	1065 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	LCA5L	O95447	670 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	TMEM253	P0C7T8	217 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CCNYL3	P0C7X3	344 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	HLA-E	P13747	358 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	GLDC	P23378	1020 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	IL12RB1	P42701	662 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MAGEA1	P43355	309 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	FNTB	P49356	437 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	STK19	P49842	368 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	TAS2R40	P59535	323 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MRPS21	P82921	87 aa	Known RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CDH18	Q13634	790 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	DMC1	Q14565	340 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	LAPTM4A	Q15012	233 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CRY1	Q16526	586 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SMTNL2	Q2TAL5	461 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	FBXO43	Q4G163	708 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	PITRM1	Q5JRX3	1037 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MANEAL	Q5VSG8	457 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	RNF219	Q5W0B1	726 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MBLAC2	Q68D91	279 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	RWDD4	Q6NW29	188 aa	Known RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	PPP1R2P3	Q6NXS1	205 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	LEKR1	Q6ZMV7	388 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SYT13	Q7L8C5	426 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	ANKS1B	Q7Z6G8	1248 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CHPF	Q8IZ52	775 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	ACRBP	Q8NEB7	543 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF564	Q8TBZ8	553 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	TRIM11	Q96F44	468 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	RPL10L	Q96L21	214 aa	Known RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MRGPRX3	Q96LB0	322 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	DESI2	Q9BSY9	194 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLC2A11	Q9BYW1	496 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	OSBPL2	Q9H1P3	480 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	GOLPH3	Q9H4A6	298 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	CD248	Q9HCU0	757 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MRPL47	Q9HD33	250 aa	Known RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	PRMT8	Q9NR22	394 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	DNAI1	Q9UI46	699 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SLCO3A1	Q9UIG8	710 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SALL4	Q9UJQ4	1053 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	MFHAS1	Q9Y4C4	1052 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	OR51B4	Q9Y5P0	310 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	STON1	Q9Y6Q2	735 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	SCIN	Q9Y6U3	715 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	ANAPC1	Q9H1A4	1944 aa		9.07	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	GOLGA6L3	A6NEY3	463 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778		K7ERQ8	282 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	DCLK1	O15075	740 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZBTB24	O43167	697 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	SNAP91	O60641	907 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	NDUFA10	O95299	355 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	MT-CO1	P00395	513 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	CD48	P09326	243 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	RARA	P10276	462 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	VAV1	P15498	845 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	PRKCH	P24723	683 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ACVRL1	P37023	503 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	SEMA3B	Q13214	749 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF177	Q13360	481 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ZNF234	Q14588	700 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	MESD	Q14696	234 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ARL13B	Q3SXY8	428 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	RABGAP1L	Q5R372	815 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	LRRC31	Q6UY01	552 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	NLRP14	Q86W24	1093 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	TP53INP2	Q8IXH6	220 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	OR7D4	Q8NG98	312 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	FNIP1	Q8TF40	1166 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	HSPH1	Q92598	858 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	ATOH1	Q92858	354 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	NTAN1	Q96AB6	310 aa		9.06	□□□□□ -0.96
PRKCH-222	ENST00000556778	MYO19	Q96H55	970 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms