RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 AXIN1O15169 862 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 PRPSAP2O60256 369 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 ALDH1A2O94788 518 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 PCK1P35558 622 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 FNDC3BQ53EP0 1204 aaKnown RBP25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 ANO7Q6IWH7 933 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 RWDD4Q6NW29 188 aaKnown RBP25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 SERPINA13PQ6UXR4 307 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 RASSF3Q86WH2 238 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 CCDC170Q8IYT3 715 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 BTBD6Q96KE9 485 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 PEBP4Q96S96 227 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 FEM1AQ9BSK4 669 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 NEU3Q9UQ49 428 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 OR51B4Q9Y5P0 310 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 RAD54BQ9Y620 910 aa25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 ZFHX2Q9C0A1 2572 aaPredicted RBP25.26■■□□□ 1.63
SDR39U1-221ENST00000556707 PLXND1Q9Y4D7 1925 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 ABCA7Q8IZY2 2146 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 GPR179Q6PRD1 2367 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 TCRBV21S2A2A0A5A6 115 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 RHOCP08134 193 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 RHOQP17081 205 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 PRKCHP24723 683 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 OR1E1P30953 314 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 SEMA3BQ13214 749 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 C6orf118Q5T5N4 469 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 ERMARDQ5T6L9 678 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 RNF219Q5W0B1 726 aaPredicted RBP25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 KIAA1211LQ6NV74 962 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 CYP4V2Q6ZWL3 525 aaPredicted RBP25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 EPAS1Q99814 870 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 SNRNP25Q9BV90 132 aaKnown RBP25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 TMEM245Q9H330 911 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 INTUQ9ULD6 942 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 USP18Q9UMW8 372 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 AP4E1Q9UPM8 1137 aa25.25■■□□□ 1.63
SDR39U1-221ENST00000556707 EIF3CLB5ME19 914 aaKnown RBP25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 PROB1E7EW31 1015 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 ECT2LQ008S8 904 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 SULT2A1Q06520 285 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 STARD3Q14849 445 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 DAB2IPQ5VWQ8 1189 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 NLRP14Q86W24 1093 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 TMTC1Q8IUR5 882 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 PSTKQ8IV42 348 aaKnown RBP25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 KDM1BQ8NB78 822 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 SPC24Q8NBT2 197 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 MDGA1Q8NFP4 955 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 HMGB4Q8WW32 186 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 MYO19Q96H55 970 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 MRGPRX3Q96LB0 322 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 PHOX2BQ99453 314 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 EIF3CQ99613 913 aaKnown RBP25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 MUC3BQ9H195 1237 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 SEMA4AQ9H3S1 761 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 GPATCH2LQ9NWQ4 482 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 VPS28Q9UK41 221 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 ERVW-1Q9UQF0 538 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 FAM186AA6NE01 2351 aa25.24■■□□□ 1.63
SDR39U1-221ENST00000556707 WDR87Q6ZQQ6 2873 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 ILVBLA1L0T0 632 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 SYNCRIPO60506 623 aaKnown RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 LCA5LO95447 670 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 SRPRAP08240 638 aaKnown RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 HLA-EP13747 358 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 CNR2P34972 360 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 CYLC1P35663 651 aaPredicted RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 CTSOP43234 321 aaPredicted RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 ST8SIA6P61647 398 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 ZNF783Q6ZMS7 281 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 DHX35Q9H5Z1 703 aaKnown RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 TMEM248Q9NWD8 314 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 NYNRINQ9P2P1 1898 aaKnown RBP25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 OTOGLQ3ZCN5 2332 aa25.23■■□□□ 1.63
SDR39U1-221ENST00000556707 EP300Q09472 2414 aaPredicted RBP25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 ZBTB24O43167 697 aaPredicted RBP25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 CREB3O43889 395 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 EPHX1P07099 455 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 GABRG2P18507 467 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 IL1R2P27930 398 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 EPHB2P29323 1055 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 HTR7P34969 479 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 MAPKAPK2P49137 400 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 CA9Q16790 459 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 SLC35G2Q8TBE7 412 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 ERLEC1Q96DZ1 483 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 BCCIPQ9P287 314 aaKnown RBP eCLIP25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 LCMT1Q9UIC8 334 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 GON4LQ3T8J9 2241 aa25.22■■□□□ 1.63
SDR39U1-221ENST00000556707 A0A0D9SEW6 157 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 HRO43593 1189 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 MAGEA1P43355 309 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 NUMBP49757 651 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 BOLA3Q53S33 107 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 RHOT2Q8IXI1 618 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 ZNF366Q8N895 744 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 RFFLQ8WZ73 363 aa25.21■■□□□ 1.63
SDR39U1-221ENST00000556707 FAM122AQ96E09 287 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms