RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ENDOD1O94919 500 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 PGGT1BP53609 377 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 DNAL1Q4LDG9 190 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 SLC39A12Q504Y0 691 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 CHSY1Q86X52 802 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
NEK9-209ENST00000556170 PHF21BQ96EK2 531 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 NUF2Q9BZD4 464 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 TAGLN3Q9UI15 199 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 CDY1Q9Y6F8 540 aa15.17■□□□□ 0.02
NEK9-209ENST00000556170 ARHGEF37A1IGU5 675 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 HACD1B0YJ81 288 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 KLHL2O95198 593 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 SERPINE1P05121 402 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 PTPN7P35236 360 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 TRIP10Q15642 601 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 DPYSL2Q16555 572 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 NCBP2-AS2Q69YL0 99 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 ZNF470Q6ECI4 717 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 RFWD3Q6PCD5 774 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 DEFB107AQ8IZN7 70 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 SCAMP5Q8TAC9 235 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 DMAP1Q9NPF5 467 aaPredicted RBP15.16■□□□□ 0.02
NEK9-209ENST00000556170 EVPLQ92817 2033 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 ZCCHC18P0CG32 403 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 MRPS6P82932 125 aaKnown RBP15.16■□□□□ 0.02
NEK9-209ENST00000556170 SPRYD7Q5W111 196 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 UBR7Q8N806 425 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 MARK4Q96L34 752 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 FGD4Q96M96 766 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 EBF4Q9BQW3 602 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 TSPAN3O60637 253 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 MT-CYBP00156 380 aaPredicted RBP15.16■□□□□ 0.02
NEK9-209ENST00000556170 BPGMP07738 259 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 CDH17Q12864 832 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 PEX6Q13608 980 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 PDPK2PQ6A1A2 396 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 TMEM154Q6P9G4 183 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 INPP5DQ92835 1189 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 MTG1Q9BT17 334 aaPredicted RBP15.16■□□□□ 0.02
NEK9-209ENST00000556170 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 ARHGEF3Q9NR81 526 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 SNX15Q9NRS6 342 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 ACOT9Q9Y305 439 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 TRPV2Q9Y5S1 764 aa15.16■□□□□ 0.02
NEK9-209ENST00000556170 LRIG2O94898 1065 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 SNUPNO95149 360 aaKnown RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 GCAP28676 217 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CCR1P32246 355 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 PTDSS1P48651 473 aaKnown RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 DDR2Q16832 855 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CLEC20AQ6ZU45 233 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 BBS5Q8N3I7 341 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CMTM5Q96DZ9 223 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 QKIQ96PU8 341 aaKnown RBP eCLIP15.15■□□□□ 0.02
NEK9-209ENST00000556170 MAF1Q9H063 256 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 NMRAL1Q9HBL8 299 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 PSAT1Q9Y617 370 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 TIMM44O43615 452 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 MSX2P35548 267 aaPredicted RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 GABRB2P47870 512 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 KLC1Q07866 573 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CNGA3Q16281 694 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 TMPRSS6Q8IU80 811 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 RELL1Q8IUW5 271 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 EFHBQ8N7U6 833 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 ATP6V1E2Q96A05 226 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 NFKBIZQ9BYH8 718 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 LRMDAQ9H2I8 198 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 ZNF831Q5JPB2 1677 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 GCATO75600 419 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CNTFP26441 200 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 VHLP40337 213 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 NME5P56597 212 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 STX1BP61266 288 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 UGP2Q16851 508 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 TDRD5Q8NAT2 981 aaKnown RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 SKA2Q8WVK7 121 aaPredicted RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 LRGUKQ96M69 825 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 ZNF512Q96ME7 567 aaPredicted RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 KCNK4Q9NYG8 393 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.15■□□□□ 0.02
NEK9-209ENST00000556170 DERAQ9Y315 318 aa15.15■□□□□ 0.02
NEK9-209ENST00000556170 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
NEK9-209ENST00000556170 ANXA9O76027 345 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 PIRTP0C851 137 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 STMN1P16949 149 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 KPNA2P52292 529 aaKnown RBP15.14■□□□□ 0.01
NEK9-209ENST00000556170 MAP3K21Q5TCX8 1036 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 ARHGAP17Q68EM7 881 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 DENND1AQ8TEH3 1009 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 PYDC1Q8WXC3 89 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
NEK9-209ENST00000556170 PRR11Q96HE9 360 aaPredicted RBP15.14■□□□□ 0.01
NEK9-209ENST00000556170 HNRNPABQ99729 332 aaKnown RBP15.14■□□□□ 0.01
NEK9-209ENST00000556170 IL1RL2Q9HB29 575 aa15.14■□□□□ 0.01
NEK9-209ENST00000556170 FAM72CH0Y354 149 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms