RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TMEM51Q9NW97 253 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 SLCO3A1Q9UIG8 710 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 TMEM59LQ9UK28 342 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 SNX10Q9Y5X0 201 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 LAMA1P25391 3075 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 SPTBN2O15020 2390 aa18.96■□□□□ 0.63
NEDD1-208ENST00000555806 PI4KAP42356 2102 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 TARSL2A2RTX5 802 aaKnown RBP18.95■□□□□ 0.62
NEDD1-208ENST00000555806 SMTNL1A8MU46 457 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 METTL12A8MUP2 240 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 CLDN11O75508 207 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 KCNK5O95279 499 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 SYPP08247 313 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 ADRB1P08588 477 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 MMP8P22894 467 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 ACSL1P33121 698 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 RDXP35241 583 aaKnown RBP18.95■□□□□ 0.62
NEDD1-208ENST00000555806 NSFP46459 744 aaKnown RBP18.95■□□□□ 0.62
NEDD1-208ENST00000555806 NOVA1P51513 510 aaKnown RBP18.95■□□□□ 0.62
NEDD1-208ENST00000555806 CDH4P55283 916 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 TRNP1Q6NT89 227 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 PSAPL1Q6NUJ1 521 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 LRSAM1Q6UWE0 723 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 LRRC31Q6UY01 552 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 ZCCHC9Q8N567 271 aaKnown RBP18.95■□□□□ 0.62
NEDD1-208ENST00000555806 EMC1Q8N766 993 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 BPIFA3Q9BQP9 254 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 BTBD1Q9H0C5 482 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 SLC25A13Q9UJS0 675 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 VPS28Q9UK41 221 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 NCKAP1Q9Y2A7 1128 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 NCOR2Q9Y618 2525 aa18.95■□□□□ 0.62
NEDD1-208ENST00000555806 ADAMTS9Q9P2N4 1935 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 ARHGAP33O14559 1287 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 CNTN5O94779 1100 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 SEMA4FO95754 770 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 PLK1P53350 603 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 ATP11AP98196 1134 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 ARID5BQ14865 1188 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 CST6Q15828 149 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 CDO1Q16878 200 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 C9orf64Q5T6V5 341 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 ARCQ7LC44 396 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 FAM131BQ86XD5 332 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 MMAAQ8IVH4 418 aaKnown RBP18.94■□□□□ 0.62
NEDD1-208ENST00000555806 HDDC3Q8N4P3 179 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 DNASE2BQ8WZ79 361 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 PCDHB18PQ96TA0 734 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 MUC3BQ9H195 1237 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 PCED1AQ9H1Q7 454 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 PABPC3Q9H361 631 aaKnown RBP18.94■□□□□ 0.62
NEDD1-208ENST00000555806 C6orf106Q9H6K1 298 aaPredicted RBP18.94■□□□□ 0.62
NEDD1-208ENST00000555806 SGK2Q9HBY8 427 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 EIF2B4Q9UI10 523 aaKnown RBP18.94■□□□□ 0.62
NEDD1-208ENST00000555806 SCML1Q9UN30 329 aa18.94■□□□□ 0.62
NEDD1-208ENST00000555806 A0A1B0GTW7 788 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 I6L893 689 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-208ENST00000555806 MID1O15344 667 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 RHOCP08134 193 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 C7P10643 843 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 UNGP13051 313 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-208ENST00000555806 SDC4P31431 198 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 PSMD8P48556 350 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 SFSWAPQ12872 951 aaKnown RBP18.93■□□□□ 0.62
NEDD1-208ENST00000555806 CLEC16AQ2KHT3 1053 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 C5orf22Q49AR2 442 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 ALFQ53S48 1182 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 SH3PXD2AQ5TCZ1 1133 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 STK40Q8N2I9 435 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 MINDY1Q8N5J2 469 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 OR52K2Q8NGK3 314 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 FEM1AQ9BSK4 669 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 FBXL12Q9NXK8 326 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 ADAM22Q9P0K1 906 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 PCDH15Q96QU1 1955 aa18.93■□□□□ 0.62
NEDD1-208ENST00000555806 NYNRINQ9P2P1 1898 aaKnown RBP18.92■□□□□ 0.62
NEDD1-208ENST00000555806 E9PAM4 449 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 BCAT2O15382 392 aaPredicted RBP18.92■□□□□ 0.62
NEDD1-208ENST00000555806 TEX33O43247 280 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 OPHN1O60890 802 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 SRGAP2O75044 1071 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 GJB6O95452 261 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 FERP16591 822 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 ZNF165P49910 485 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 ACCSLQ4AC99 568 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 ACBD5Q5T8D3 534 aaPredicted RBP18.92■□□□□ 0.62
NEDD1-208ENST00000555806 N4BP2L1Q5TBK1 243 aaPredicted RBP18.92■□□□□ 0.62
NEDD1-208ENST00000555806 USP30Q70CQ3 517 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 TFAP2DQ7Z6R9 452 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 OR2I1PQ8NGU4 316 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 RXFP2Q8WXD0 754 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 PTPRN2Q92932 1015 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 ALG14Q96F25 216 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 HAPLN3Q96S86 360 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 OMDQ99983 421 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 MPP6Q9NZW5 540 aa18.92■□□□□ 0.62
NEDD1-208ENST00000555806 TBC1D30Q9Y2I9 924 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms