RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 MAP3K13O43283 966 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 AP5Z1O43299 807 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 SRGAP2O75044 1071 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 SIN3BO75182 1162 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 FTLP02792 175 aaPredicted RBP14.07□□□□□ -0.16
SNX6-203ENST00000555416 GPD1P21695 349 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 ADRA1BP35368 520 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 DHPSP49366 369 aaPredicted RBP14.07□□□□□ -0.16
SNX6-203ENST00000555416 TPMTP51580 245 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 PLK1P53350 603 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 CDH4P55283 916 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 ZNF252P-AS1Q0IIN9 211 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 MAMLD1Q13495 774 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 CSRP2Q16527 193 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 MANEALQ5VSG8 457 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 RNF219Q5W0B1 726 aaPredicted RBP14.07□□□□□ -0.16
SNX6-203ENST00000555416 PRR23CQ6ZRP0 262 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 STRADAQ7RTN6 431 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
SNX6-203ENST00000555416 OR2T3Q8NH03 318 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 SIPA1Q96FS4 1042 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 SPACA7Q96KW9 195 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 PSMB7Q99436 277 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 ITM2CQ9NQX7 267 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 TMEM74BQ9NUR3 256 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 CAPN11Q9UMQ6 739 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 NEU3Q9UQ49 428 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 NUP205Q92621 2012 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 NUMA1Q14980 2115 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 A0A0D9SEW6 157 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 SNAP91O60641 907 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 LRP3O75074 770 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 CLDN11O75508 207 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ASLP04424 464 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ZNF806P0C7X5 589 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ITPKAP23677 461 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ZNF143P52747 638 aaPredicted RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 RPS14P62263 151 aaKnown RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 ZBED6P86452 979 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 RPL6Q02878 288 aaKnown RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 MTA1Q13330 715 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 HNRNPA1L2Q32P51 320 aaKnown RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 PLEKHA7Q6IQ23 1121 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 METTL3Q86U44 580 aaKnown RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 CCDC117Q8IWD4 279 aaPredicted RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 PYROXD2Q8N2H3 581 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 NUP58Q9BVL2 599 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 PAXBP1Q9Y5B6 917 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 PCDHGA5Q9Y5G8 931 aa14.06□□□□□ -0.16
SNX6-203ENST00000555416 ATXN2Q99700 1313 aaKnown RBP14.06□□□□□ -0.16
SNX6-203ENST00000555416 DOCK4Q8N1I0 1966 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 ZBTB24O43167 697 aaPredicted RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 ZNF217O75362 1048 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 MOCS3O95396 460 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 MT-CO1P00395 513 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 SRPRAP08240 638 aaKnown RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 C7P10643 843 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 GLDCP23378 1020 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 CASP14P31944 242 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 SLC12A1Q13621 1099 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 ARID5BQ14865 1188 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 RSPO4Q2I0M5 234 aaPredicted RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 TDRD12Q587J7 1177 aaKnown RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 CYP2U1Q7Z449 544 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 FAM124AQ86V42 546 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 C11orf74Q86VG3 221 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 OR7D4Q8NG98 312 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 FRS2Q8WU20 508 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 PIGKQ92643 395 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 PRCCQ92733 491 aaPredicted RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 SYN2Q92777 582 aaPredicted RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 PTPRN2Q92932 1015 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 TOE1Q96GM8 510 aaKnown RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 VCPIP1Q96JH7 1222 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 FAM129BQ96TA1 746 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 ISCUQ9H1K1 167 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 NDFIP2Q9NV92 336 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 WSB2Q9NYS7 404 aaPredicted RBP14.05□□□□□ -0.16
SNX6-203ENST00000555416 OR12D3Q9UGF7 316 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 ADAMTS1Q9UHI8 967 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 CEP192Q8TEP8 1941 aa14.05□□□□□ -0.16
SNX6-203ENST00000555416 A0A087X0T9 212 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 TMEM191CA6NGB0 347 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 K7ERQ8 282 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 RTN2O75298 545 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 IGLV3-19P01714 112 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 RHOCP08134 193 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 FAM228BP0C875 321 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 GZMAP12544 262 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 CD6P30203 668 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 METAP1P53582 386 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 ST8SIA6P61647 398 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 BYSLQ13895 437 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms