RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CPB2Q96IY4 423 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PEBP4Q96S96 227 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SORT1Q99523 831 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SYT17Q9BSW7 474 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 C10orf88Q9H8K7 445 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PLAC1Q9HBJ0 212 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 MOCS1Q9NZB8 636 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PAIP2BQ9ULR5 123 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PRSS51A0A1B0GVH4 220 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TMEM221A6NGB7 291 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 APOL1O14791 398 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ZFXP17010 805 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 MX2P20592 715 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TXNL4AP83876 142 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 BMPR2Q13873 1038 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 RFTN1Q14699 578 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 HERC3Q15034 1050 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CCDC153Q494R4 210 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TAPT1Q6NXT6 567 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PACS1Q6VY07 963 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 Q6ZNX1 250 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF467Q7Z7K2 595 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 UNC93AQ86WB7 457 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SREK1Q8WXA9 508 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CDKL2Q92772 493 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CDCA5Q96FF9 252 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SIGLEC10Q96LC7 697 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PRPF18Q99633 342 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF670Q9BS34 389 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 DDX18Q9NVP1 670 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 EMCNQ9ULC0 261 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PCDHB12Q9Y5F1 795 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 POLR2AP24928 1970 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MDM4O15151 490 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 ITM2AO43736 263 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 C8BP07358 591 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PFKMP08237 780 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MLNP12872 115 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PSMC3P17980 439 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 SDC4P31431 198 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 SCNN1AP37088 669 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 TMED1Q13445 227 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PCBP1Q15365 356 aaKnown RBP eCLIP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 TAF5Q15542 800 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PKDCCQ504Y2 493 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 N4BP2L1Q5TBK1 243 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC9A4Q6AI14 798 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 RWDD4Q6NW29 188 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 EPGNQ6UW88 154 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 BNC2Q6ZN30 1099 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 ZCCHC23Q6ZST2 131 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CYP4V2Q6ZWL3 525 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CDKL3Q8IVW4 592 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 RP9Q8TA86 221 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 SHKBP1Q8TBC3 707 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 HM13Q8TCT9 377 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 VPS50Q96JG6 964 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 NUF2Q9BZD4 464 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MRPL40Q9NQ50 206 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 TUBA8Q9NY65 449 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 RGSL1A5PLK6 1076 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 AVILO75366 819 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 ZBED1O96006 694 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 VTNP04004 478 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 FAM163BP0C2L3 166 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CYP2C8P10632 490 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CYP3A5P20815 502 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 BCAR1P56945 870 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 RPL10AP62906 217 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 CBX3Q13185 183 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 FLOT2Q14254 428 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PIGGQ5H8A4 983 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 IRAK1BP1Q5VVH5 260 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 ARHGAP17Q68EM7 881 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 OLFML1Q6UWY5 402 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 DLK2Q6UY11 383 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 DPH6Q7L8W6 267 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PGAM4Q8N0Y7 254 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 PLD5Q8N7P1 536 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 KYQ8NBH2 561 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 GPRC5AQ8NFJ5 357 aa10.93□□□□□ -0.66
MTHFD1-210ENST00000555252 BEST2Q8NFU1 509 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms