RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TMLHEQ9NVH6 421 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 DPP3Q9NY33 737 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 TRPM5Q9NZQ8 1165 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 CALCOCO1Q9P1Z2 691 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 TBC1D14Q9P2M4 693 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 CPSF3Q9UKF6 684 aaKnown RBP5.14□□□□□ -1.59
ATXN3-229ENST00000554672 PPT2Q9UMR5 302 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 C2CD2Q9Y426 696 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 NFE2L3Q9Y4A8 694 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 PCDHGB2Q9Y5G2 931 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 VWA8A3KMH1 1905 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 CACNA1EQ15878 2313 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 DMXL2Q8TDJ6 3036 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 ABCA7Q8IZY2 2146 aa5.14□□□□□ -1.59
ATXN3-229ENST00000554672 A0A0B4J269 797 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 A0A1W2PQF6 199 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF840PA6NDX5 716 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 FLRT2O43155 660 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 RRP8O43159 456 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 TNFSF14O43557 240 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 FAM189A1O60320 539 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 HUS1O60921 280 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 DTNBO60941 627 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 CER1O95813 267 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 HLA-EP13747 358 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 HOXB2P14652 356 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ITPKBP27987 946 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 CD6P30203 668 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 NTSR1P30989 418 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ARL4AP40617 200 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 PNPLA4P41247 253 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 MAGEA11P43364 429 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ZXDBP98169 803 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 MYL7Q01449 175 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SMAD1Q15797 465 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 HLA-BQ31612 363 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SV2CQ496J9 727 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 BTBD8Q5XKL5 378 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 GPR155Q7Z3F1 870 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF513Q8N8E2 541 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 RBBP8NLQ8NC74 664 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 IPO4Q8TEX9 1081 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 OTUB2Q96DC9 234 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 FUBP3Q96I24 572 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 FCRL3Q96P31 734 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 GAREM1Q9H706 876 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ZDHHC4Q9NPG8 344 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 DEC1Q9P2X7 70 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 PLA2G2DQ9UNK4 145 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF451Q9Y4E5 1061 aa5.13□□□□□ -1.59
ATXN3-229ENST00000554672 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
ATXN3-229ENST00000554672 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 FAM149AA5PLN7 773 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 HNRNPDLO14979 420 aaKnown RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 BCAT2O15382 392 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 FGF10O15520 208 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 ARHGAP6O43182 974 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 TULP3O75386 442 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 OLFM2O95897 454 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PIGRP01833 764 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CDK4P11802 303 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 IMPDH2P12268 514 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 JUPP14923 745 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CD247P20963 164 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PCSK1P29120 753 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 OXTRP30559 389 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 ABCD1P33897 745 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 MATKP42679 507 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 WASP42768 502 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 LHX1P48742 406 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 KDSRQ06136 332 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PLEKHN1Q494U1 663 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms