RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PRPF31Q8WWY3 499 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 FGF13Q92913 245 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 MCRS1Q96EZ8 462 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 HIST1H2AHQ96KK5 128 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 HIST1H2AJQ99878 128 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 TMEM175Q9BSA9 504 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 APOL6Q9BWW8 343 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 AGXT2Q9BYV1 514 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GCOM2Q9BZD3 368 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 RWDD1Q9H446 243 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 PRDM13Q9H4Q3 707 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 CHST12Q9NRB3 414 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 RBM12Q9NTZ6 932 aaKnown RBP3.49□□□□□ -1.85
SLIRP-202ENST00000553981 TBC1D22BQ9NU19 505 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 TRPM5Q9NZQ8 1165 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ANKFY1Q9P2R3 1169 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 FBXW11Q9UKB1 542 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 SPO11Q9Y5K1 396 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 GVINP1Q7Z2Y8 2422 aa3.49□□□□□ -1.85
SLIRP-202ENST00000553981 ATG2BQ96BY7 2078 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 PDCD11Q14690 1871 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 DMXL1Q9Y485 3027 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 EP300Q09472 2414 aaPredicted RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 CBX4O00257 560 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 LEFTY2O00292 366 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZBTB43O43298 467 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 TBC1D4O60343 1298 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SLITRK3O94933 977 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 CTDNEP1O95476 244 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 GLUD1P00367 558 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 RPLP2P05387 115 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SRGAP2BP0DMP2 458 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 CHRNB1P11230 501 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 GLRA2P23416 452 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 PDIA3P30101 505 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ARL2P36404 184 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 BRCC3P46736 316 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 GLUD2P49448 558 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 WNT3AP56704 352 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 PTENP60484 403 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 LAMTOR4Q0VGL1 99 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ST3GAL1Q11201 340 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 TRAF1Q13077 416 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MRPL49Q13405 166 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 GIT2Q14161 759 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 UBXN2BQ14CS0 331 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SF3A2Q15428 464 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ST3GAL2Q16842 350 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF528Q3MIS6 628 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 XKR3Q5GH77 459 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 STXBP5Q5T5C0 1151 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 VITQ6UXI7 678 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 DOK3Q7L591 496 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MIER3Q7Z3K6 550 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 GDF7Q7Z4P5 450 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF410Q86VK4 478 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ARHGEF19Q8IW93 802 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZZZ3Q8IYH5 903 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 RNF149Q8NC42 400 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 NAF1Q96HR8 494 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZMAT2Q96NC0 199 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MAP7D2Q96T17 732 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 RIT2Q99578 217 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 TEKT3Q9BXF9 490 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MRPL9Q9BYD2 267 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 ZMAT4Q9H898 229 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 KCNMB3Q9NPA1 279 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 AKIP1Q9NQ31 210 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MRPL17Q9NRX2 175 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 NRBP2Q9NSY0 501 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 RBM28Q9NW13 759 aaKnown RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 OXSMQ9NWU1 459 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SYBUQ9NX95 663 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 DACT1Q9NYF0 836 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 FNIP2Q9P278 1114 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 FBXO4Q9UKT5 387 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 CDH7Q9ULB5 785 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 KCNJ14Q9UNX9 436 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 CHST2Q9Y4C5 530 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 COL4A3BPQ9Y5P4 624 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 SNX14Q9Y5W7 946 aa3.48□□□□□ -1.85
SLIRP-202ENST00000553981 KMT2BQ9UMN6 2715 aaPredicted RBP3.48□□□□□ -1.85
SLIRP-202ENST00000553981 MYO16Q9Y6X6 1858 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CACNA1BQ00975 2339 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SPTBN4Q9H254 2564 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 GREB1Q4ZG55 1949 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FSD2A1L4K1 749 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 WDR27A2RRH5 827 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 hCG_1984214I3L0E3 225 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TAF4O00268 1085 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 RNASET2O00584 256 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SLC30A4O14863 429 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 GAS7O60861 476 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 KINO60870 393 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 NCR1O76036 304 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 PCDH8O95206 1070 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 LARGE1O95461 756 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms