RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 CNTNAP2Q9UHC6 1331 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 F5P12259 2224 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 CCDC194A0A1B0GVG4 234 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 EXTL3O43909 919 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 TMEM127O75204 238 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 FGAP02671 866 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 GYPEP15421 78 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 HK1P19367 917 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 MEF2AQ02078 507 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 SEMA3BQ13214 749 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 EFCAB12Q6NXP0 572 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 Q6ZS52 159 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 RALGPS2Q86X27 583 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 YAF2Q8IY57 180 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 ADAMTS14Q8WXS8 1223 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 RSAD1Q9HA92 442 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF302Q9NR11 478 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 C14orf119Q9NWQ9 140 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 BAZ2AQ9UIF9 1905 aaKnown RBP6.48□□□□□ -1.37
ATXN3-223ENST00000553686 NFASCO94856 1347 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 SALL3Q9BXA9 1300 aa6.48□□□□□ -1.37
ATXN3-223ENST00000553686 MYO9AB2RTY4 2548 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 MYH8P13535 1937 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 NOTCH2Q04721 2471 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 IGKV6D-21A0A0A0MT36 114 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 DNAJC6O75061 913 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 PRKD3O94806 890 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 POMCP01189 267 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 RHOP08100 348 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 PTPN2P17706 415 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 RPL17P18621 184 aaKnown RBP6.47□□□□□ -1.37
ATXN3-223ENST00000553686 FGFR4P22455 802 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 DPP6P42658 865 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 GPC3P51654 580 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 CLCN3P51790 818 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 CCT2P78371 535 aaKnown RBP6.47□□□□□ -1.37
ATXN3-223ENST00000553686 APBA1Q02410 837 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 PTPAQ15257 358 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 FAM78AQ5JUQ0 283 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 C1QL3Q5VWW1 255 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 SWSAP1Q6NVH7 229 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 MIS18BP1Q6P0N0 1132 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 USP17L6PQ6QN14 398 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 SPATS2Q86XZ4 545 aaKnown RBP6.47□□□□□ -1.37
ATXN3-223ENST00000553686 MFSD6LQ8IWD5 586 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 GLB1L3Q8NCI6 653 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-223ENST00000553686 SMARCD2Q92925 531 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 FATE1Q969F0 183 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 PIGSQ96S52 555 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 C2orf42Q9NWW7 574 aa6.47□□□□□ -1.37
ATXN3-223ENST00000553686 PIN4Q9Y237 131 aaKnown RBP6.47□□□□□ -1.37
ATXN3-223ENST00000553686 SDK1Q7Z5N4 2213 aa6.46□□□□□ -1.37
ATXN3-223ENST00000553686 MYBPHLA2RUH7 354 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 ENO4A6NNW6 628 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 SPECC1L-ADORA2AF8WAN1 911 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 CHADO15335 359 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 TADA2AO75478 443 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 GASTP01350 101 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 MTHFD2P13995 350 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-223ENST00000553686 KIF5BP33176 963 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 ACACAQ13085 2346 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-223ENST00000553686 TRIP6Q15654 476 aaKnown RBP6.46□□□□□ -1.38
ATXN3-223ENST00000553686 MAPK6Q16659 721 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 FUT10Q6P4F1 479 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 HAUS6Q7Z4H7 955 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 MRPL10Q7Z7H8 261 aaKnown RBP6.46□□□□□ -1.38
ATXN3-223ENST00000553686 COLGALT2Q8IYK4 626 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 CNNM3Q8NE01 707 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 SPATA18Q8TC71 538 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 COG1Q8WTW3 980 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 TSPEARQ8WU66 669 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 PIGKQ92643 395 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 FAM167AQ96KS9 214 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 RIOX1Q9H6W3 641 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 IFT122Q9HBG6 1241 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 NRBP2Q9NSY0 501 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 MARCH5Q9NX47 278 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 PCDHB2Q9Y5E7 798 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 MYH4Q9Y623 1939 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.38
ATXN3-223ENST00000553686 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 APC2O95996 2303 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 MYH7BA7E2Y1 1941 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 CYR61O00622 381 aa6.45□□□□□ -1.38
ATXN3-223ENST00000553686 MEIS2O14770 477 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms