RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 CFAP52Q8N1V2 620 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 ATPAF2Q8N5M1 289 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 C12orf76Q8N812 135 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-206ENST00000553447 DEPDC1BQ8WUY9 529 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 SMG7Q92540 1137 aaKnown RBP18.04■□□□□ 0.48
PSEN1-206ENST00000553447 PPP2R3CQ969Q6 453 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 PRICKLE1Q96MT3 831 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-206ENST00000553447 SPATA13Q96N96 652 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 TSGA13Q96PP4 275 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 FUT8Q9BYC5 575 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 PRO3102Q9H379 93 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 PIDD1Q9HB75 910 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 DZANK1Q9NVP4 752 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 CFAP97Q9P2B7 532 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 SH3BP1Q9Y3L3 701 aa18.04■□□□□ 0.48
PSEN1-206ENST00000553447 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-206ENST00000553447 ZFP37Q9Y6Q3 630 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-206ENST00000553447 LEFTY2O00292 366 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 HSPA9P38646 679 aaKnown RBP18.03■□□□□ 0.48
PSEN1-206ENST00000553447 CDH4P55283 916 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 WASHC5Q12768 1159 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 CASP8Q14790 479 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 FAM182AQ5T1J6 154 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ANKRD20A3Q5VUR7 823 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ARHGAP36Q6ZRI8 547 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 HTR3DQ70Z44 454 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 LRRC49Q8IUZ0 686 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 FAM217AQ8IXS0 508 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 PPIL6Q8IXY8 311 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 CMTM8Q8IZV2 173 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 MREGQ8N565 214 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 TAB3Q8N5C8 712 aaPredicted RBP18.03■□□□□ 0.48
PSEN1-206ENST00000553447 CPT1BQ92523 772 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 SEPT10Q9P0V9 454 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ZMYM5Q9UJ78 669 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 SHOC2Q9UQ13 582 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 ZNF510Q9Y2H8 683 aa18.03■□□□□ 0.48
PSEN1-206ENST00000553447 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 ATP8B1O43520 1251 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 OPHN1O60890 802 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 CCNCP24863 283 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 PTPN3P26045 913 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 OR1E1P30953 314 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 AVPR1AP37288 418 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 PAPOLAP51003 745 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 SGSHP51688 502 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 RPS24P62847 133 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 BASP1P80723 227 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 TTC39BQ5VTQ0 682 aaPredicted RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 TMC5Q6UXY8 1006 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 ARHGEF18Q6ZSZ5 1173 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 CHST9Q7L1S5 443 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 TMC3Q7Z5M5 1100 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 HOOK3Q86VS8 718 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 NAT8LQ8N9F0 302 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 PRCCQ92733 491 aaPredicted RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 TXLNGYQ9BZA5 131 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 FOXP3Q9BZS1 431 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 SMG9Q9H0W8 520 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 NSUN3Q9H649 340 aaKnown RBP18.02■□□□□ 0.48
PSEN1-206ENST00000553447 IGFLR1Q9H665 355 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 RAB6BQ9NRW1 208 aa18.02■□□□□ 0.48
PSEN1-206ENST00000553447 MYO18AQ92614 2054 aaKnown RBP18.02■□□□□ 0.47
PSEN1-206ENST00000553447 ARHGAP42A6NI28 874 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 RASA4BC9J798 803 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 KCNK1O00180 336 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 SMAPO00193 183 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 GFRA2O00451 464 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 SCAMP3O14828 347 aaKnown RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 RASA4O43374 803 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 TSPAN3O60637 253 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 MAFKO60675 156 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 RAMP2O60895 175 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 PPFIA2O75334 1257 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 CLDN11O75508 207 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 METTL18O95568 372 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 CEBPBP17676 345 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 CHKAP35790 457 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 YBEYP58557 167 aaPredicted RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 KCNJ11Q14654 390 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 PARP15Q460N3 678 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 ANKRD22Q5VYY1 191 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 TIGD7Q6NT04 549 aaPredicted RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 ZNF567Q8N184 647 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 ZCCHC9Q8N567 271 aaKnown RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 TSEN2Q8NCE0 465 aaKnown RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 HMCESQ96FZ2 354 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 VAT1Q99536 393 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 TSPYL1Q9H0U9 437 aa18.01■□□□□ 0.47
PSEN1-206ENST00000553447 MRPS23Q9Y3D9 190 aaKnown RBP18.01■□□□□ 0.47
PSEN1-206ENST00000553447 A0A1B0GVM2 712 aa18■□□□□ 0.47
PSEN1-206ENST00000553447 E2F8A0AVK6 867 aa18■□□□□ 0.47
PSEN1-206ENST00000553447 TCAF2A6NFQ2 919 aa18■□□□□ 0.47
PSEN1-206ENST00000553447 MAP2K7O14733 419 aa18■□□□□ 0.47
PSEN1-206ENST00000553447 CHADO15335 359 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms