RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 DLDP09622 509 aaKnown RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 HLA-EP13747 358 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PRKCHP24723 683 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 IL1R2P27930 398 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 HOXA6P31267 233 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 L1CAMP32004 1257 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PCK1P35558 622 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 DGKEP52429 567 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 AIF1P55008 147 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 SEMA3BQ13214 749 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 SLC12A1Q13621 1099 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ENPP2Q13822 863 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PIGHQ14442 188 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ACAP1Q15027 740 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 FNDC3BQ53EP0 1204 aaKnown RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 RNF219Q5W0B1 726 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 SDE2Q6IQ49 451 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ANO7Q6IWH7 933 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 TMTC1Q8IUR5 882 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 CAMKK1Q8N5S9 505 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ZNF366Q8N895 744 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 NIPA2Q8N8Q9 360 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ZBTB44Q8NCP5 570 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PHOX2BQ99453 314 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 FEM1AQ9BSK4 669 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 FAM126AQ9BYI3 521 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 DHX35Q9H5Z1 703 aaKnown RBP14.51□□□□□ -0.09
PTCH1-226ENST00000553011 CD248Q9HCU0 757 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 NDFIP2Q9NV92 336 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 USP18Q9UMW8 372 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 OR51B4Q9Y5P0 310 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 CEP192Q8TEP8 1941 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 VPS13AQ96RL7 3174 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 TCRBV21S2A2A0A5A6 115 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 NPC1O15118 1278 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 LCA5LO95447 670 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 ASLP04424 464 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 RHOQP17081 205 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 OR1E1P30953 314 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 CYLC1P35663 651 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 MAGEA1P43355 309 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 STK19P49842 368 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 PLK1P53350 603 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 NRLP54845 237 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 OXCT1P55809 520 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 ERMARDQ5T6L9 678 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 TXNRD3NBQ6F5E7 133 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 SERPINA13PQ6UXR4 307 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 RAD9BQ6WBX8 426 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 SETD3Q86TU7 594 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 NLRP14Q86W24 1093 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 LONP2Q86WA8 852 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 TMEM139Q8IV31 216 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 SLC35G2Q8TBE7 412 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 MYO19Q96H55 970 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 MRGPRX3Q96LB0 322 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 KCTD15Q96SI1 283 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 EPAS1Q99814 870 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 NCAPGQ9BPX3 1015 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 TPSD1Q9BZJ3 242 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 MUC3BQ9H195 1237 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 POLMQ9NP87 494 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 INTUQ9ULD6 942 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 TFR2Q9UP52 801 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 PLA2G4CQ9UP65 541 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 ERVW-1Q9UQF0 538 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 PCDHGA2Q9Y5H1 932 aa14.5□□□□□ -0.09
PTCH1-226ENST00000553011 EPN1Q9Y6I3 576 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-226ENST00000553011 RALGAPA1Q6GYQ0 2036 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 PTPRZ1P23471 2315 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 A0A0D9SEW6 157 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 TMEM110-MUSTN1A8MSY1 372 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 EIF3CLB5ME19 914 aaKnown RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 AXIN1O15169 862 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 SNAP91O60641 907 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 PROSCO94903 275 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 NDUFA10O95299 355 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 EPHX1P07099 455 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 EPHB2P29323 1055 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 ECT2LQ008S8 904 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 SLC25A11Q02978 314 aaKnown RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 SRSF5Q13243 272 aaKnown RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 E2F5Q15329 346 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 SMTNL2Q2TAL5 461 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 KCNT1Q5JUK3 1230 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 C6orf118Q5T5N4 469 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 WDR5BQ86VZ2 330 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 RASSF3Q86WH2 238 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 MDGA1Q8NFP4 955 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 OR7D4Q8NG98 312 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 ATRIPQ8WXE1 791 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 RPL10LQ96L21 214 aaKnown RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 PSMB7Q99436 277 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 EIF3CQ99613 913 aaKnown RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 BAG1Q99933 345 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-226ENST00000553011 TMEM245Q9H330 911 aa14.49□□□□□ -0.09
PTCH1-226ENST00000553011 MTG2Q9H4K7 406 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms