RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 KLRB1Q12918 225 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 MCM6Q14566 821 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 ZNF542PQ5EBM4 170 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
SNRPF-204ENST00000552085 SFR1Q86XK3 245 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 WDR49Q8IV35 697 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 ZNF548Q8NEK5 533 aaPredicted RBP12.91□□□□□ -0.34
SNRPF-204ENST00000552085 OR13H1Q8NG92 308 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 WFDC5Q8TCV5 224 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 SLC2A14Q8TDB8 520 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 NAT6Q93015 286 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 JAKMIP2Q96AA8 810 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 TTC17Q96AE7 1141 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 FAM131CQ96AQ9 280 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 TMA16Q96EY4 203 aaKnown RBP12.91□□□□□ -0.34
SNRPF-204ENST00000552085 MRGPRX3Q96LB0 322 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 MYOCQ99972 504 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 DNAJC28Q9NX36 388 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 CLIC5Q9NZA1 410 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 CSNK1G3Q9Y6M4 447 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 SDK2Q58EX2 2172 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 EDDM13A0A1B0GTR0 161 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 A0A1W2PQ27 194 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 A0A1W2PQ64 194 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 WIPF3A6NGB9 483 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 IL1BP01584 269 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 ASLP04424 464 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 PRKCGP05129 697 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 ZNF445P59923 1031 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 ESPL1Q14674 2120 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 ACOT1Q86TX2 421 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
SNRPF-204ENST00000552085 STK40Q8N2I9 435 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 KDM1BQ8NB78 822 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 GALNT11Q8NCW6 608 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 PLD4Q96BZ4 506 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 CCDC3Q9BQI4 270 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 MARCH2Q9P0N8 246 aa12.9□□□□□ -0.34
SNRPF-204ENST00000552085 TTC34A8MYJ7 566 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 SLC31A1O15431 190 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CLDN1O95832 211 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CD82P27701 267 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CSKP41240 450 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 RPIAP49247 311 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 LACTB2Q53H82 288 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 HEATR4Q86WZ0 1026 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 SLC22A18ASQ8N1D0 253 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 FOXP3Q9BZS1 431 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
SNRPF-204ENST00000552085 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 FOXJ2Q9P0K8 574 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 LOXL2Q9Y4K0 774 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
SNRPF-204ENST00000552085 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 PRR19A6NJB7 356 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 H3BM21 787 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 TPP1O14773 563 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 AQP9O43315 295 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 GABBR2O75899 941 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 PRLRP16471 622 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 ITIH1P19827 911 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 SLC6A4P31645 630 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 CCKBRP32239 447 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 UBA7P41226 1012 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 SGSHP51688 502 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 KIF11P52732 1056 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 METAP1P53582 386 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 MYL6P60660 151 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 TRIP4Q15650 581 aaPredicted RBP12.88□□□□□ -0.35
SNRPF-204ENST00000552085 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 RAD54LQ92698 747 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 GLMNQ92990 594 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 ABHD17AQ96GS6 310 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 CGRRF1Q99675 332 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 BOCQ9BWV1 1114 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 DKK3Q9UBP4 350 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
SNRPF-204ENST00000552085 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
SNRPF-204ENST00000552085 C9orf172C9J069 976 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms