RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TEKT5Q96M29 485 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 VAT1Q99536 393 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SLC39A8Q9C0K1 460 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 NDFIP2Q9NV92 336 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 PIH1D1Q9NWS0 290 aaKnown RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 MOCS1Q9NZB8 636 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SAMD15Q9P1V8 674 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TRHDEQ9UKU6 1024 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TLR6Q9Y2C9 796 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 IKBKGQ9Y6K9 419 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ERI2A8K979 691 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 DFFAO00273 331 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 TM9SF1O15321 606 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CACNG3O60359 315 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 KIAA0754O94854 1291 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 JCHAINP01591 159 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 MT-ND3P03897 115 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SNRPAP09012 282 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 DHRS4L1P0CG22 281 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CCNCP24863 283 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 ADRA1DP25100 572 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 GBP2P32456 591 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 EFEMP1Q12805 493 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SMARCB1Q12824 385 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SF3A3Q12874 501 aaKnown RBP eCLIP11.78□□□□□ -0.523e-17■■■■■ 41.4
RAB5C-208ENST00000551338 BMPR2Q13873 1038 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CRYMQ14894 314 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SPRED3Q2MJR0 410 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 MGAT5BQ3V5L5 792 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 TRIM60Q495X7 471 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 RASIP1Q5U651 963 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 HHATQ5VTY9 493 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CYS1Q717R9 158 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 RNF168Q8IYW5 571 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 ATPAF2Q8N5M1 289 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 LZTR1Q8N653 840 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 RTL3Q8N8U3 475 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 USP33Q8TEY7 942 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 VWCEQ96DN2 955 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SPATA17Q96L03 361 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 AGAP3Q96P47 875 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 IL12RB2Q99665 862 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 PAIP2Q9BPZ3 127 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 RNF208Q9H0X6 261 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 C12orf65Q9H3J6 166 aaKnown RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CWH43Q9H720 699 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-208ENST00000551338 TMEM51Q9NW97 253 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SLC17A6Q9P2U8 582 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 MTRRQ9UBK8 725 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 ANKRD36A6QL64 1941 aa11.78□□□□□ -0.52
RAB5C-208ENST00000551338 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 HMX2A2RU54 273 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ADAM12O43184 909 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MAFKO60675 156 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 LPXNO60711 386 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 USP12O75317 370 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 RFPL1O75677 317 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ZDHHC11BP0C7U3 371 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 PYGBP11216 843 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ATF6P18850 670 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ETV4P43268 484 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 PSEN1P49768 467 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 SERPINB9P50453 376 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TUBP50607 506 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TLE2Q04725 743 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TAF10Q12962 218 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 SPANXN3Q5MJ09 141 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ANKS3Q6ZW76 656 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 DEFB128Q7Z7B8 93 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 CCNJLQ8IV13 435 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF276Q8N554 614 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ATP6V0D2Q8N8Y2 350 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 C2orf15Q8WU43 125 aaKnown RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TTC17Q96AE7 1141 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF419Q96HQ0 510 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-208ENST00000551338 C1orf74Q96LT6 269 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 NAT9Q9BTE0 207 aa11.77□□□□□ -0.53
RAB5C-208ENST00000551338 TTPALQ9BTX7 342 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms