RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PTPN7P35236 360 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 NRIP1P48552 1158 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 TGM3Q08188 693 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 PTAR1Q7Z6K3 402 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 MREGQ8N565 214 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ASPSCR1Q9BZE9 553 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 TLR9Q9NR96 1032 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 VPS51Q9UID3 782 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ADGRA2Q96PE1 1338 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ITGB4P16144 1822 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 CLASP2O75122 1294 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 NOL4O94818 638 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 TCEA2Q15560 299 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 OTOAQ7RTW8 1153 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 SHDQ96IW2 340 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ACBD6Q9BR61 282 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 TRIM15Q9C019 465 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 GMIPQ9P107 970 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 UBR2Q8IWV8 1755 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 OPLAHO14841 1288 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 APOA4P06727 396 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 EPHX1P07099 455 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 OR56A5P0C7T3 313 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 MYL2P10916 166 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 COL6A1P12109 1028 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TYMPP19971 482 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 GPR1P46091 355 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 RAD23BP54727 409 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 CDH17Q12864 832 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 FAM183BPQ6ZVS7 135 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 NLRP9Q7RTR0 991 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 HTR3CQ8WXA8 447 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SGF29Q96ES7 293 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TRABDQ9H4I3 376 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 RAD18Q9NS91 495 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SFMBT1Q9UHJ3 866 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TDRKHQ9Y2W6 561 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 HNRNPCL1O60812 293 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 PYGBP11216 843 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 EFTUD2Q15029 972 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 C15orf59Q2T9L4 293 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 ZBTB41Q5SVQ8 909 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SYTL1Q8IYJ3 562 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 OTUB1Q96FW1 271 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SYTL2Q9HCH5 934 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 ALG13Q9NP73 1137 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 POLMQ9NP87 494 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 BATF3Q9NR55 127 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 ARHGEF4Q9NR80 690 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 A0A0U1RQF3 1178 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 NR2C2P49116 596 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 LILRA4P59901 499 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 AGAP9Q5VTM2 703 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SAMD11Q96NU1 681 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 VAT1Q99536 393 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 PRPF18Q99633 342 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SHOC2Q9UQ13 582 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 A0A1W2PQH9 124 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 FSHRP23945 695 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 KYNUQ16719 465 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 CAPRIN2Q6IMN6 1127 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 LNX1Q8TBB1 728 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 AUTS2Q8WXX7 1259 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SNX27Q96L92 541 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 CCDC138Q96M89 665 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 TSC22D3Q99576 134 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 PSMC3IPQ9P2W1 217 aaPredicted RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 RNF112Q9ULX5 631 aa12.44□□□□□ -0.42
NR4A1-215ENST00000550557 SMG5Q9UPR3 1016 aaKnown RBP12.44□□□□□ -0.42
NR4A1-215ENST00000550557 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 GRM6O15303 877 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 ITGB6P18564 788 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 HPCAP84074 193 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 YTHDF3Q7Z739 585 aaKnown RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 KIF2BQ8N4N8 673 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 FBXO25Q8TCJ0 367 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 TEX12Q9BXU0 123 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 NLNQ9BYT8 704 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 ASB3Q9Y575 518 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 NCANO14594 1321 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 PTPRJQ12913 1337 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 GJB6O95452 261 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms