RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KCTD13Q8WZ19 329 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 CLSTN2Q9H4D0 955 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 RWDD2AQ9UIY3 292 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 TSPAN16Q9UKR8 245 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 COL27A1Q8IZC6 1860 aaPredicted RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 TULP2O00295 520 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 P4HA2O15460 535 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 GNA14O95837 355 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 VDRP11473 427 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 YWHAEP62258 255 aaKnown RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 SKOR1P84550 965 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 ARID5AQ03989 594 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 BST2Q10589 180 aaKnown RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 FNDC3BQ53EP0 1204 aaKnown RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 MPP7Q5T2T1 576 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 ADGRF1Q5T601 910 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 BSPRYQ5W0U4 402 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 ZNF574Q6ZN55 896 aaPredicted RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 OXR1Q8N573 874 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 EXD3Q8N9H8 876 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 EHBP1Q8NDI1 1231 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 CYB5D2Q8WUJ1 264 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 GOLGA1Q92805 767 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 KAT5Q92993 513 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 VCPIP1Q96JH7 1222 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX54-206ENST00000549271 PABPC3Q9H361 631 aaKnown RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 RELNP78509 3460 aa12.64□□□□□ -0.39
DDX54-206ENST00000549271 USP9YO00507 2555 aaPredicted RBP12.64□□□□□ -0.39
DDX54-206ENST00000549271 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 DOCK9Q9BZ29 2069 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 TLR4O00206 839 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 O00370 1275 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 USP12O75317 370 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 GP1BBP13224 206 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 TBXAS1P24557 533 aaPredicted RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 HLA-FP30511 346 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 NCEH1Q6PIU2 408 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 SPATS2Q86XZ4 545 aaKnown RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 TMA16Q96EY4 203 aaKnown RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 RSPH9Q9H1X1 276 aaPredicted RBP12.63□□□□□ -0.39
DDX54-206ENST00000549271 THSD1Q9NS62 852 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 ABCC13Q9NSE7 274 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 STARD5Q9NSY2 213 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 SERGEFQ9UGK8 458 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 SCML1Q9UN30 329 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 PLA2G4CQ9UP65 541 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 NCKAP1Q9Y2A7 1128 aa12.63□□□□□ -0.39
DDX54-206ENST00000549271 NOTCH2Q04721 2471 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 YJEFN3A6XGL0 299 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 E7ENQ6 273 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 TRIM38O00635 465 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 SIGLEC6O43699 453 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 IGLV3-27P01718 113 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 AFPP02771 609 aaKnown RBP12.62□□□□□ -0.39
DDX54-206ENST00000549271 PAEPP09466 180 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 CCR5P51681 352 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 DAOAP59103 153 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
DDX54-206ENST00000549271 ATG14Q6ZNE5 492 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ARHGEF19Q8IW93 802 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 AHI1Q8N157 1196 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
DDX54-206ENST00000549271 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 OR2T34Q8NGX1 318 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 SLC35F5Q8WV83 523 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 NDRG1Q92597 394 aaKnown RBP12.62□□□□□ -0.39
DDX54-206ENST00000549271 AZIN2Q96A70 460 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 NT5C1BQ96P26 610 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
DDX54-206ENST00000549271 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms