RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 DAB1O75553 588 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 PDHA1P08559 390 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 KDELR1P24390 212 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 MIPP30301 263 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 MATKP42679 507 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 RAB33AQ14088 237 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 TAZQ16635 292 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 DCAF6Q58WW2 860 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 NUP93Q8N1F7 819 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 SLC2A13Q96QE2 648 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 TCF25Q9BQ70 676 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 POPDC2Q9HBU9 364 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 NGRNQ9NPE2 291 aaKnown RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 STK39Q9UEW8 545 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 PCSK1NQ9UHG2 260 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 MTCL1Q9Y4B5 1905 aaKnown RBP16.92■□□□□ 0.3
BRF1-208ENST00000546997 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.92■□□□□ 0.3
BRF1-208ENST00000546997 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
BRF1-208ENST00000546997 LTFP02788 710 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 EPHB2P29323 1055 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 VPS41P49754 854 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 TUBP50607 506 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 SLC34A1Q06495 639 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 OTUD1Q5VV17 481 aaPredicted RBP16.92■□□□□ 0.3
BRF1-208ENST00000546997 TPGS2Q68CL5 300 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 GSTA5Q7RTV2 222 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 SCML4Q8N228 414 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 CMASQ8NFW8 434 aaPredicted RBP16.92■□□□□ 0.3
BRF1-208ENST00000546997 SPPL3Q8TCT6 385 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 FAM172AQ8WUF8 416 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 POF1BQ8WVV4 589 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 EDEM1Q92611 657 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 GATA6Q92908 595 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 MLXIPLQ9NP71 852 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.92■□□□□ 0.3
BRF1-208ENST00000546997 ZNF212Q9UDV6 495 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 USP18Q9UMW8 372 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 RWDD3Q9Y3V2 267 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
BRF1-208ENST00000546997 HIDE1A8MVS5 230 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 NDC80O14777 642 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 PTPN9P43378 593 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 ATXN1P54253 815 aaKnown RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 HDAC4P56524 1084 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 LAMB3Q13751 1172 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 CAMK1Q14012 370 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 OASLQ15646 514 aaKnown RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 FYB2Q5VWT5 728 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 PRUNE1Q86TP1 453 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 GPR65Q8IYL9 337 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 GIPC2Q8TF65 315 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 IRGQQ8WZA9 623 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 PEBP4Q96S96 227 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 TBCBQ99426 244 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 CYP4F11Q9HBI6 524 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 ENTPD7Q9NQZ7 604 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
BRF1-208ENST00000546997 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 STX18Q9P2W9 335 aaKnown RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 LZTS1Q9Y250 596 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 PCDHA11Q9Y5I1 949 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 GRM6O15303 877 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 SPATA31D3P0C874 917 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 VCPP55072 806 aaKnown RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 AP1B1Q10567 949 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 CCDC6Q16204 474 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 BSPRYQ5W0U4 402 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 SPATA31D4Q6ZUB0 917 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 CYP4V2Q6ZWL3 525 aaPredicted RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 ARHGAP22Q7Z5H3 698 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 NCSTNQ92542 709 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 NKD2Q969F2 451 aaPredicted RBP16.91■□□□□ 0.3
BRF1-208ENST00000546997 NT5C3BQ969T7 300 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 SPATA17Q96L03 361 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 PBX4Q9BYU1 374 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 NMUR1Q9HB89 426 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 IL37Q9NZH6 218 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 ZFP69BQ9UJL9 534 aa16.91■□□□□ 0.3
BRF1-208ENST00000546997 CXCL14O95715 111 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 CD48P09326 243 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 NCAM1P13591 858 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 RGS19P49795 217 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 PLPP4Q5VZY2 271 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 FAM47EQ6ZV65 393 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 SCD5Q86SK9 330 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 GLIS1Q8NBF1 620 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 KCTD6Q8NC69 237 aa16.9■□□□□ 0.3
BRF1-208ENST00000546997 CENPIQ92674 756 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms