RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NUP205Q92621 2012 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 ATG13O75143 517 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 RHOCP08134 193 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 GOT1P17174 413 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 MAPKAPK2P49137 400 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 ZNF135P52742 658 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-211ENST00000545998 TPI1P60174 286 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 KIF5AQ12840 1032 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 HSF5Q4G112 596 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-211ENST00000545998 PPP6R3Q5H9R7 873 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-211ENST00000545998 C6orf118Q5T5N4 469 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 C11orf63Q6NUN7 778 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 APCDD1Q8J025 514 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 ALLCQ8N6M5 410 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 SORCS1Q8WY21 1168 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 FEM1AQ9BSK4 669 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 NDFIP2Q9NV92 336 aa21.04■□□□□ 0.96
HMGA2-211ENST00000545998 SPATA6Q9NWH7 488 aaPredicted RBP21.04■□□□□ 0.96
HMGA2-211ENST00000545998 WASH4PA8MWX3 477 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 EEF2KO00418 725 aaKnown RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 FGF10O15520 208 aaPredicted RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 BUB1O43683 1085 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 MOCS3O95396 460 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 KRT7P08729 469 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 POLR2EP19388 210 aaKnown RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 COMTP21964 271 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 HCAR3P49019 387 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 NUBP1P53384 320 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 ATP13A4Q4VNC1 1196 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 RNF219Q5W0B1 726 aaPredicted RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 RFX8Q6ZV50 586 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 TRMT11Q7Z4G4 463 aaKnown RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 POLNQ7Z5Q5 900 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 C1orf210Q8IVY1 113 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 FAM71BQ8TC56 605 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 UCMAQ8WVF2 138 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 CATSPERBQ9H7T0 1116 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 CWC15Q9P013 229 aaKnown RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 THAP10Q9P2Z0 257 aaPredicted RBP21.03■□□□□ 0.96
HMGA2-211ENST00000545998 TRIM10Q9UDY6 481 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 HYOU1Q9Y4L1 999 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 ALG6Q9Y672 507 aa21.03■□□□□ 0.96
HMGA2-211ENST00000545998 ILVBLA1L0T0 632 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 KLF8O95600 359 aaPredicted RBP21.02■□□□□ 0.96
HMGA2-211ENST00000545998 GJC1P36383 396 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 ARSEP51690 589 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 ZNF783Q6ZMS7 281 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 CCDC33Q8N5R6 958 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 RTL3Q8N8U3 475 aaKnown RBP21.02■□□□□ 0.96
HMGA2-211ENST00000545998 TXNDC5Q8NBS9 432 aaKnown RBP21.02■□□□□ 0.96
HMGA2-211ENST00000545998 CYB5D2Q8WUJ1 264 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 ACDQ96AP0 544 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 PPP1R9BQ96SB3 815 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 ACOX2Q99424 681 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 GOLPH3Q9H4A6 298 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 PCDH18Q9HCL0 1135 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 POLR3BQ9NW08 1133 aaPredicted RBP21.02■□□□□ 0.96
HMGA2-211ENST00000545998 DNAI1Q9UI46 699 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 MMP17Q9ULZ9 603 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 CACNA1HO95180 2353 aa21.02■□□□□ 0.96
HMGA2-211ENST00000545998 A0A0D9SEW6 157 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 NPC1O15118 1278 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 ADAM23O75077 832 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 PTMAP06454 111 aaKnown RBP21.02■□□□□ 0.95
HMGA2-211ENST00000545998 ATP5BP06576 529 aaKnown RBP21.02■□□□□ 0.95
HMGA2-211ENST00000545998 DLDP09622 509 aaKnown RBP21.02■□□□□ 0.95
HMGA2-211ENST00000545998 NAP1L1P55209 391 aaKnown RBP21.02■□□□□ 0.95
HMGA2-211ENST00000545998 DPYSQ14117 519 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 PTPRNQ16849 979 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 LRRC38Q5VT99 294 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 SYT13Q7L8C5 426 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 TSC1Q92574 1164 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 MUC3BQ9H195 1237 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 KCNF1Q9H3M0 494 aa21.02■□□□□ 0.95
HMGA2-211ENST00000545998 SGK1O00141 431 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 GALR2O43603 387 aaPredicted RBP21.01■□□□□ 0.95
HMGA2-211ENST00000545998 SPOPO43791 374 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 PAPSS2O95340 614 aaPredicted RBP21.01■□□□□ 0.95
HMGA2-211ENST00000545998 ASLP04424 464 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 NTSR1P30989 418 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 NUMBP49757 651 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 CCR3P51677 355 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 CDH6P55285 790 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 SATB1Q01826 763 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 ENPP2Q13822 863 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 ZNF234Q14588 700 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 E2F5Q15329 346 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 DAAM2Q86T65 1068 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 CHPFQ8IZ52 775 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 MAML2Q8IZL2 1156 aaPredicted RBP21.01■□□□□ 0.95
HMGA2-211ENST00000545998 PSMB7Q99436 277 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 PRMT8Q9NR22 394 aaPredicted RBP21.01■□□□□ 0.95
HMGA2-211ENST00000545998 CACNA2D2Q9NY47 1150 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 VPS28Q9UK41 221 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 PLA2G4CQ9UP65 541 aa21.01■□□□□ 0.95
HMGA2-211ENST00000545998 CKAP5Q14008 2032 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 MUC6Q6W4X9 2439 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 USP34Q70CQ2 3546 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 H3BRJ5 948 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 DAPK3O43293 454 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms