RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 C2CD2Q9Y426 696 aa4.33□□□□□ -1.72
SNHG1-220ENST00000544550 ASCC3Q8N3C0 2202 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ANO9A1A5B4 782 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF840PA6NDX5 716 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 KPNA7A9QM74 516 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 H0Y8X5 98 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PPEF2O14830 753 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 VILLO15195 856 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 OGTO15294 1046 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CACNG3O60359 315 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 HIP1RO75146 1068 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MT-CO3P00414 261 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 OAS1P00973 400 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ADRB2P07550 413 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MBL2P11226 248 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MYF5P13349 255 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CKMT2P17540 419 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CD247P20963 164 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CD27P26842 260 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PSMA5P28066 241 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PCSK1P29120 753 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 KRT2P35908 639 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CTSKP43235 329 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MAGEA11P43364 429 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 KIR3DL1P43629 444 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 AFMP43652 599 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 LSSP48449 732 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 LHX1P48742 406 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 IRAK1P51617 712 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 GUCY2FP51841 1108 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 BCAT1P54687 386 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 GABREP78334 506 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 DNAJC3Q13217 504 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MAPRE1Q15691 268 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 FUT11Q495W5 492 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CYP27C1Q4G0S4 372 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SFRP5Q5T4F7 317 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 VSTM1Q6UX27 236 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 MIB1Q86YT6 1006 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 TMPRSS6Q8IU80 811 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CCDC83Q8IWF9 413 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SCN4BQ8IWT1 228 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 OXR1Q8N573 874 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 FAM26EQ8N5C1 309 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 NAT16Q8N8M0 369 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 STKLD1Q8NE28 680 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PDZD8Q8NEN9 1154 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 THAP3Q8WTV1 239 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 UCMAQ8WVF2 138 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 WASF1Q92558 559 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 GRAMD1AQ96CP6 724 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 LIN37Q96GY3 246 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SGSM3Q96HU1 749 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ZBTB45Q96K62 511 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 Q96M66 194 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SLITRK1Q96PX8 696 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ELF4Q99607 663 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SEMA3CQ99985 751 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 NTPCRQ9BSD7 190 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SLC6A17Q9H1V8 727 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ASB7Q9H672 318 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 NCOA5Q9HCD5 579 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 GP6Q9HCN6 339 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CD93Q9NPY3 652 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 TMLHEQ9NVH6 421 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 SMPD4Q9NXE4 827 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 DDX43Q9NXZ2 648 aaKnown RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PRR13Q9NZ81 148 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 WDR35Q9P2L0 1181 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF451Q9Y4E5 1061 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 PLXND1Q9Y4D7 1925 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 CELSR3Q9NYQ7 3312 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 TSC2P49815 1807 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 KIAA1549LQ6ZVL6 1849 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 BPTFQ12830 3046 aa4.32□□□□□ -1.72
SNHG1-220ENST00000544550 ZNF462Q96JM2 2506 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 KCNJ18B7U540 433 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 NEDD8-MDP1E9PL57 170 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 SLC16A4O15374 487 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 HUS1O60921 280 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 PPFIA2O75334 1257 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 F13BP05160 661 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 MPOP05164 745 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 OR52Z1P0C646 297 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 RPS6KB1P23443 525 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ACP1P24666 158 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 HSD3B2P26439 372 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 RBMS1P29558 406 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 CDC25AP30304 524 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 ABCD1P33897 745 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 GRIK1P39086 918 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 TRAPPC10P48553 1259 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 LIG4P49917 911 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 CDR1P51861 262 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 CDH8P55286 799 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 CLDN6P56747 220 aa4.31□□□□□ -1.72
SNHG1-220ENST00000544550 NOP14P78316 857 aaKnown RBP4.31□□□□□ -1.72
SNHG1-220ENST00000544550 IL9RQ01113 521 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms