RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 CXCR3P49682 368 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 ATXN3P54252 364 aaPredicted RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 RPS14P62263 151 aaKnown RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 GFPT1Q06210 699 aaPredicted RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 SLC12A1Q13621 1099 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 SLC25A52Q3SY17 297 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 TRNP1Q6NT89 227 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 APTXQ7Z2E3 356 aaKnown RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 C14orf80Q86SX3 495 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 ZCCHC9Q8N567 271 aaKnown RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 EMC1Q8N766 993 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 KDM1BQ8NB78 822 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 CADM4Q8NFZ8 388 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 SNX19Q92543 992 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 NT5C3BQ969T7 300 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 CFAP57Q96MR6 1250 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 MIR1-1HGQ9H1L0 117 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 CAPN10Q9HC96 672 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 ANLNQ9NQW6 1124 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
LDHB-210ENST00000544151 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
LDHB-210ENST00000544151 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.11■□□□□ 0.17
LDHB-210ENST00000544151 EDDM13A0A1B0GTR0 161 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 I6L893 689 aaPredicted RBP16.11■□□□□ 0.17
LDHB-210ENST00000544151 KCNK5O95279 499 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 F9P00740 461 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 GNSP15586 552 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 MMP8P22894 467 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 ACSL1P33121 698 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 RDXP35241 583 aaKnown RBP16.11■□□□□ 0.17
LDHB-210ENST00000544151 OXCT1P55809 520 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 SULT2A1Q06520 285 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 ZNF177Q13360 481 aaPredicted RBP16.11■□□□□ 0.17
LDHB-210ENST00000544151 CDO1Q16878 200 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 PSAPL1Q6NUJ1 521 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 TRIM72Q6ZMU5 477 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 PHLDB2Q86SQ0 1253 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 SLC30A5Q8TAD4 765 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 BTBD1Q9H0C5 482 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 RSPH9Q9H1X1 276 aaPredicted RBP16.11■□□□□ 0.17
LDHB-210ENST00000544151 TMPRSS4Q9NRS4 437 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 SLC25A13Q9UJS0 675 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 SNX10Q9Y5X0 201 aa16.11■□□□□ 0.17
LDHB-210ENST00000544151 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 RNASEH1O60930 286 aaKnown RBP16.1■□□□□ 0.17
LDHB-210ENST00000544151 CLDN11O75508 207 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 SEMA4FO95754 770 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 NNMTP40261 264 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
LDHB-210ENST00000544151 NOVA1P51513 510 aaKnown RBP16.1■□□□□ 0.17
LDHB-210ENST00000544151 CDH4P55283 916 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 ATP11AP98196 1134 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 FAM131BQ86XD5 332 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 MINDY1Q8N5J2 469 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 OR52K2Q8NGK3 314 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 GANCQ8TET4 914 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 MUC3BQ9H195 1237 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 PABPC3Q9H361 631 aaKnown RBP16.1■□□□□ 0.17
LDHB-210ENST00000544151 C6orf106Q9H6K1 298 aaPredicted RBP16.1■□□□□ 0.17
LDHB-210ENST00000544151 SLCO3A1Q9UIG8 710 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 VPS28Q9UK41 221 aa16.1■□□□□ 0.17
LDHB-210ENST00000544151 A0A1B0GTW7 788 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 METTL12A8MUP2 240 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 MID1O15344 667 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 CNTN5O94779 1100 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 GJB6O95452 261 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 RHOCP08134 193 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 SYPP08247 313 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 C7P10643 843 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 UNGP13051 313 aaPredicted RBP16.09■□□□□ 0.17
LDHB-210ENST00000544151 PSMD8P48556 350 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 CST6Q15828 149 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 C5orf22Q49AR2 442 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 ALFQ53S48 1182 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 C9orf64Q5T6V5 341 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 SH3PXD2AQ5TCZ1 1133 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 TFAP2DQ7Z6R9 452 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 MMAAQ8IVH4 418 aaKnown RBP16.09■□□□□ 0.17
LDHB-210ENST00000544151 HDDC3Q8N4P3 179 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 OR2I1PQ8NGU4 316 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 DNASE2BQ8WZ79 361 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 PCDHB18PQ96TA0 734 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 SERGEFQ9UGK8 458 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 EIF2B4Q9UI10 523 aaKnown RBP16.09■□□□□ 0.17
LDHB-210ENST00000544151 SCML1Q9UN30 329 aa16.09■□□□□ 0.17
LDHB-210ENST00000544151 CHD5Q8TDI0 1954 aa16.08■□□□□ 0.16
LDHB-210ENST00000544151 A0A1W2PP55 124 aa16.08■□□□□ 0.16
LDHB-210ENST00000544151 TARSL2A2RTX5 802 aaKnown RBP16.08■□□□□ 0.16
LDHB-210ENST00000544151 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
LDHB-210ENST00000544151 E9PAM4 449 aa16.08■□□□□ 0.16
LDHB-210ENST00000544151 TEX33O43247 280 aa16.08■□□□□ 0.16
LDHB-210ENST00000544151 OPHN1O60890 802 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms