RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 RFPL3O75679 317 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 IL1BP01584 269 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 TBC1D3HP0C7X1 549 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 TACR2P21452 398 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 HNF1BP35680 557 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 DNAJC3Q13217 504 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 TBC1D3GQ6DHY5 549 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 TBC1D3CQ6IPX1 549 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 ARHGEF19Q8IW93 802 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 TBC1D3Q8IZP1 549 aaPredicted RBP23.36■■□□□ 1.33
CDKN3-207ENST00000543789 EID2Q8N6I1 236 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 EHBP1Q8NDI1 1231 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 BTN2A3PQ96KV6 586 aa23.36■■□□□ 1.33
CDKN3-207ENST00000543789 BBC3Q96PG8 261 aaPredicted RBP23.36■■□□□ 1.33
CDKN3-207ENST00000543789 HOOK1Q9UJC3 728 aaKnown RBP23.36■■□□□ 1.33
CDKN3-207ENST00000543789 LOC400499M0QZD8 3231 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 MZF1P28698 734 aaPredicted RBP23.35■■□□□ 1.33
CDKN3-207ENST00000543789 SULT2A1Q06520 285 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 SLC12A1Q13621 1099 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 ELAVL3Q14576 367 aaKnown RBP23.35■■□□□ 1.33
CDKN3-207ENST00000543789 C6orf118Q5T5N4 469 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.35■■□□□ 1.33
CDKN3-207ENST00000543789 STK32AQ8WU08 396 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 DCBLD2Q96PD2 775 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 SLC4A5Q9BY07 1137 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 ERVMER34-1Q9H9K5 563 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 SLC12A6Q9UHW9 1150 aa23.35■■□□□ 1.33
CDKN3-207ENST00000543789 GOLGA4Q13439 2230 aaKnown RBP23.35■■□□□ 1.33
CDKN3-207ENST00000543789 F5H5T6 163 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 TRUB2O95900 331 aaKnown RBP23.34■■□□□ 1.33
CDKN3-207ENST00000543789 KRT5P13647 590 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 EPHA8P29322 1005 aaPredicted RBP23.34■■□□□ 1.33
CDKN3-207ENST00000543789 RXRGP48443 463 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 STK19P49842 368 aaPredicted RBP23.34■■□□□ 1.33
CDKN3-207ENST00000543789 NXPH1P58417 271 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 ISM2Q6H9L7 571 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 DENND1BQ6P3S1 775 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 PRPF39Q86UA1 669 aaKnown RBP23.34■■□□□ 1.33
CDKN3-207ENST00000543789 NXPE2Q96DL1 559 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 KREMEN1Q96MU8 473 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 MED15Q96RN5 788 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 POPDC2Q9HBU9 364 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 CNTN6Q9UQ52 1028 aa23.34■■□□□ 1.33
CDKN3-207ENST00000543789 LATO43561 262 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 CD44P16070 742 aaKnown RBP23.33■■□□□ 1.33
CDKN3-207ENST00000543789 PDGFRAP16234 1089 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 PPP1R2P41236 205 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 ACADVLP49748 655 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 CLDN6P56747 220 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 YWHAZP63104 245 aaKnown RBP23.33■■□□□ 1.33
CDKN3-207ENST00000543789 BNIP3Q12983 259 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 TMEM110Q86TL2 294 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 OXR1Q8N573 874 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 ATP6V0D2Q8N8Y2 350 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 MFSD2AQ8NA29 543 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 TSC1Q92574 1164 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 CRELD1Q96HD1 420 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 TIGD1Q96MW7 591 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 SPAG5Q96R06 1193 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 KDM4CQ9H3R0 1056 aa23.33■■□□□ 1.33
CDKN3-207ENST00000543789 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDKN3-207ENST00000543789 SMG1Q96Q15 3661 aaKnown RBP23.32■■□□□ 1.32
CDKN3-207ENST00000543789 KCNU1A8MYU2 1149 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 MED7O43513 233 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 IGLV3-25P01717 112 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 VAV1P15498 845 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 ABCG1P45844 678 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 NUMBP49757 651 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 PLK1P53350 603 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 OXCT1P55809 520 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 PPP2CBP62714 309 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 PPP2CAP67775 309 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 TARDBPQ13148 414 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDKN3-207ENST00000543789 NAPEPLDQ6IQ20 393 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 TTI2Q6NXR4 508 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 CCAR2Q8N163 923 aaKnown RBP23.32■■□□□ 1.32
CDKN3-207ENST00000543789 FRS2Q8WU20 508 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 THAP9Q9H5L6 903 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 ARHGAP20Q9P2F6 1191 aa23.32■■□□□ 1.32
CDKN3-207ENST00000543789 E5RJQ4 531 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 LETM1O95202 739 aaPredicted RBP23.31■■□□□ 1.32
CDKN3-207ENST00000543789 DRD3P35462 400 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 NUDT1P36639 197 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 KCNH2Q12809 1159 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 EIF4EBP2Q13542 120 aaPredicted RBP23.31■■□□□ 1.32
CDKN3-207ENST00000543789 MEA1Q16626 185 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 HES3Q5TGS1 186 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 FAM46CQ5VWP2 391 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 KLHL10Q6JEL2 608 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 DSG4Q86SJ6 1040 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 ZNF606Q8WXB4 792 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 PRMT1Q99873 361 aaKnown RBP23.31■■□□□ 1.32
CDKN3-207ENST00000543789 MAN1B1Q9UKM7 699 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 AK5Q9Y6K8 562 aa23.31■■□□□ 1.32
CDKN3-207ENST00000543789 SLC7A4O43246 635 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 MAGEC1O60732 1142 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 RTN2O75298 545 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 SLC2A3P11169 496 aa23.3■■□□□ 1.32
CDKN3-207ENST00000543789 VASPP50552 380 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms