RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
TNC-212ENST00000542877 DRD4P21917 467 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 DSG3P32926 999 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 ITGA1P56199 1179 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 ELAVL2Q12926 359 aaKnown RBP13.35□□□□□ -0.27
TNC-212ENST00000542877 TOP3AQ13472 1001 aaPredicted RBP13.35□□□□□ -0.27
TNC-212ENST00000542877 MAMLD1Q13495 774 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 LRRC55Q6ZSA7 311 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 ARCQ7LC44 396 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 FAM83AQ86UY5 434 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 ALLCQ8N6M5 410 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 OSMRQ99650 979 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 C1orf50Q9BV19 199 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 IL22Q9GZX6 179 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 PIH1D1Q9NWS0 290 aaKnown RBP13.35□□□□□ -0.27
TNC-212ENST00000542877 SH3BP4Q9P0V3 963 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 CDK20Q8IZL9 346 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
TNC-212ENST00000542877 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 KLRC4O43908 158 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 AXLP30530 894 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 CAPN10Q9HC96 672 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 ANKRD63C9JTQ0 380 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PTDSS1P48651 473 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 PRKCQQ04759 706 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 GRIK3Q13003 919 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PAN2Q504Q3 1202 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 PSTKQ8IV42 348 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 ST13P5Q8NFI4 369 aaPredicted RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 POPDC2Q9HBU9 364 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 CNGB3Q9NQW8 809 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 A0A0B4J269 797 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 FAM237BA0A1B0GVD1 139 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 E5RJQ4 531 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 GRIN3BO60391 1043 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 RAB27AP51159 221 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PKNOX1P55347 436 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 C16orf46Q6P387 395 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 SPATA13Q96N96 652 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 REXO4Q9GZR2 422 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 SPRTNQ9H040 489 aaPredicted RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 STN1Q9H668 368 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 LBPP18428 481 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 COX10Q12887 443 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 GSTA3Q16772 222 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 AADACL2Q6P093 401 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 C8orf59Q8N0T1 100 aaPredicted RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 LNX1Q8TBB1 728 aaPredicted RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
TNC-212ENST00000542877 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
TNC-212ENST00000542877 PIPSLA2A3N6 862 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 KPNA6O60684 536 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 CLTBP09497 229 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 OR1E1P30953 314 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 CDH8P55286 799 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 SLC20A2Q08357 652 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.27
TNC-212ENST00000542877 TSHZ1Q6ZSZ6 1077 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 ARMC7Q9H6L4 198 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 FANCEQ9HB96 536 aa13.33□□□□□ -0.27
TNC-212ENST00000542877 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 GJB6O95452 261 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ITGAVP06756 1048 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 RFX3P48380 749 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 FCGRTP55899 365 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 GRIK4Q16099 956 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 EPHX4Q8IUS5 362 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ZNF614Q8N883 585 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 SLC2A14Q8TDB8 520 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 BAP1Q92560 729 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms