RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SLC26A11Q86WA9 606 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 RASGEF1CQ8N431 466 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 AZIN2Q96A70 460 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ULK4Q96C45 1275 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 PEBP4Q96S96 227 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 OMDQ99983 421 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ACBD6Q9BR61 282 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SMG9Q9H0W8 520 aaKnown RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 DERAQ9Y315 318 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 GYG2O15488 501 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SUPT7LO94864 414 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TCN1P20061 433 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 WASP42768 502 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ARHGEF7Q14155 803 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 FAM187BQ17R55 369 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TTC39BQ5VTQ0 682 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 POLNQ7Z5Q5 900 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 NPAS4Q8IUM7 802 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 LRRC43Q8N309 656 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SPATA13Q96N96 652 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 DDX50Q9BQ39 737 aaKnown RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ROPN1BQ9BZX4 212 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 MANSC1Q9H8J5 431 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ROPN1Q9HAT0 212 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 KPNA3O00505 521 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MTSS1O43312 755 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 FGBP02675 491 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 PTPN7P35236 360 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MMP13P45452 471 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 GEMP55040 296 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MOGSQ13724 837 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ACAP1Q15027 740 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 IQCKQ8N0W5 287 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ZCCHC9Q8N567 271 aaKnown RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 NAT14Q8WUY8 206 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ARNTL2Q8WYA1 636 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CPT1BQ92523 772 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CASP10Q92851 521 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 E2F7Q96AV8 911 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MFSD3Q96ES6 412 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CHRAC1Q9NRG0 131 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CNTN3Q9P232 1028 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CRLS1Q9UJA2 301 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MRPS23Q9Y3D9 190 aaKnown RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ENPP3O14638 875 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 GMNNO75496 209 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 METTL18O95568 372 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ITGA9Q13797 1035 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 HIC1Q14526 733 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 C15orf39Q6ZRI6 1047 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 TRIM42Q8IWZ5 723 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 PNPLA1Q8N8W4 532 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 OR10T2Q8NGX3 314 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 RFWD2Q8NHY2 731 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MYOCQ99972 504 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 BCO2Q9BYV7 579 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 IL1RL2Q9HB29 575 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 FBXO6Q9NRD1 293 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 DTLQ9NZJ0 730 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 AAR2Q9Y312 384 aaKnown RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MYH9P35579 1960 aaKnown RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 CES2O00748 559 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 AXIN1O15169 862 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 HAUS5O94927 633 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 TAC1P20366 129 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 GLUD2P49448 558 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ELMSAN1Q6PJG2 1045 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ANGPTL8Q6UXH0 198 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ANKS1BQ7Z6G8 1248 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 IFNEQ86WN2 208 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ZNF366Q8N895 744 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 ART4Q93070 314 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MCRS1Q96EZ8 462 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 MECRQ9BV79 373 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 FAM96AQ9H5X1 160 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 TMEM161AQ9NX61 479 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 UXTQ9UBK9 157 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-208ENST00000542570 PKP3Q9Y446 797 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 PCDHB9Q9Y5E1 797 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 PCDHGC4Q9Y5F7 938 aa10.36□□□□□ -0.75
TOP3A-208ENST00000542570 A0A1W2PRU2 124 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 SUPT3HB4E1H0 165 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 FAM72CH0Y354 149 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 OPHN1O60890 802 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 SUPT3HO75486 399 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 RTN3O95197 1032 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-208ENST00000542570 ART3Q13508 389 aa10.35□□□□□ -0.75
TOP3A-208ENST00000542570 DDX39BQ13838 428 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms