RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TGM2P21980 687 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 CYP3A7P24462 503 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 CST5P28325 142 aaPredicted RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 HOXA7P31268 230 aaPredicted RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 PTGER1P34995 402 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 TNNT2P45379 298 aaPredicted RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 EIF5P55010 431 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 SHC2P98077 582 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 ID2Q02363 134 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 CFHR1Q03591 330 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 G3BP1Q13283 466 aaKnown RBP eCLIP3.58□□□□□ -1.84
USP28-210ENST00000542033 TAF5Q15542 800 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 TRIP6Q15654 476 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 GPR162Q16538 588 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 GALNTL6Q49A17 601 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 PXDC1Q5TGL8 231 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 ANKRD45Q5TZF3 282 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 LIPMQ5VYY2 423 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 FAAH2Q6GMR7 532 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 DGAT2L7PQ6IED9 249 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 RETSATQ6NUM9 610 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 C1QL2Q7Z5L3 287 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 MTERF4Q7Z6M4 381 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
USP28-210ENST00000542033 ADGRF4Q8IZF3 695 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 FAM47BQ8NA70 645 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 BCAS4Q8TDM0 211 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 PIGOQ8TEQ8 1089 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 SIGLEC11Q96RL6 698 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 PIGSQ96S52 555 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 PYM1Q9BRP8 204 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 SCNM1Q9BWG6 230 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 WASH6PQ9NQA3 447 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 TUBA8Q9NY65 449 aaPredicted RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 KIF17Q9P2E2 1029 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 SRP68Q9UHB9 627 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 PCDHA10Q9Y5I2 948 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 COPG1Q9Y678 874 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 C2CD4BA6NLJ0 364 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 E5RJQ4 531 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 E7EVH7 732 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 EYA2O00167 538 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 SEPT4O43236 478 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 HNRNPRO43390 633 aaKnown RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 MBD4O95243 580 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 TPM2P07951 284 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 XBP1P17861 261 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 CALRP27797 417 aaKnown RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 ELF1P32519 619 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 SOX2P48431 317 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 RXRGP48443 463 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 AARSP49588 968 aaKnown RBP eCLIP3.57□□□□□ -1.84
USP28-210ENST00000542033 MCM2P49736 904 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 PAPOLAP51003 745 aaKnown RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 RBM5P52756 815 aaKnown RBP eCLIP3.57□□□□□ -1.84
USP28-210ENST00000542033 MPP1Q00013 466 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 HSP90AB3PQ58FF7 597 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 EARS2Q5JPH6 523 aaKnown RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 SYNE3Q6ZMZ3 975 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 ZNF793Q6ZN11 406 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 FAM57BQ71RH2 274 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 SYT13Q7L8C5 426 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 UBE2Q1Q7Z7E8 422 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 MOGAT3Q86VF5 341 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 LRRTM4Q86VH4 590 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 ANKRD13BQ86YJ7 626 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 SUGP1Q8IWZ8 645 aaKnown RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 ADGRF3Q8IZF5 1079 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 CLEC4CQ8WTT0 213 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 ZFPM2Q8WW38 1151 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 ZNF778Q96MU6 729 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 ZNF830Q96NB3 372 aaPredicted RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 GATA5Q9BWX5 397 aaPredicted RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 SLC26A6Q9BXS9 759 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 OSBPL5Q9H0X9 879 aaPredicted RBP3.57□□□□□ -1.84
USP28-210ENST00000542033 PDE11AQ9HCR9 933 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.57□□□□□ -1.84
USP28-210ENST00000542033 KCND3Q9UK17 655 aa3.57□□□□□ -1.84
USP28-210ENST00000542033 COL3A1P02461 1466 aaPredicted RBP3.56□□□□□ -1.84
USP28-210ENST00000542033 ZNF335Q9H4Z2 1342 aaPredicted RBP3.56□□□□□ -1.84
USP28-210ENST00000542033 DPPA5A6NC42 116 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 F8W810 466 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 ADAM10O14672 748 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 UGDHO60701 494 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 RNASEH2AO75792 299 aaKnown RBP3.56□□□□□ -1.84
USP28-210ENST00000542033 FAM155BO75949 473 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 HEXIM1O94992 359 aaKnown RBP3.56□□□□□ -1.84
USP28-210ENST00000542033 NFATC1O95644 943 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 CTSAP10619 480 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 KRT9P35527 623 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 ADD2P35612 726 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 PRKAA2P54646 552 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 TLE2Q04725 743 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 PDCLQ13371 301 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 CUL4BQ13620 913 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 PDE1CQ14123 709 aaPredicted RBP3.56□□□□□ -1.84
USP28-210ENST00000542033 ETFDHQ16134 617 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 Q4G0T1 1027 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 ZNF425Q6IV72 752 aa3.56□□□□□ -1.84
USP28-210ENST00000542033 MZT2BQ6NZ67 158 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms