RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ITGB4P16144 1822 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 CLUHO75153 1309 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 MYBPHLA2RUH7 354 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 NT5C1B-RDH14C9J2C7 533 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 CBX4O00257 560 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 ZBTB24O43167 697 aaPredicted RBP16.43■□□□□ 0.22
VARS2-212ENST00000542001 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 PGM3O95394 542 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 GRK2P25098 689 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 DNAJB2P25686 324 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 MATKP42679 507 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 PTK2BQ14289 1009 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
VARS2-212ENST00000542001 SYPL2Q5VXT5 272 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 BNC2Q6ZN30 1099 aaPredicted RBP16.43■□□□□ 0.22
VARS2-212ENST00000542001 RINLQ6ZS11 566 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 SLC27A5Q9Y2P5 690 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 ETS2P15036 469 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 DDR2Q16832 855 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 NKX1-2Q9UD57 310 aaPredicted RBP16.43■□□□□ 0.22
VARS2-212ENST00000542001 CHD4Q14839 1912 aa16.43■□□□□ 0.22
VARS2-212ENST00000542001 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 PITX1P78337 314 aaPredicted RBP16.42■□□□□ 0.22
VARS2-212ENST00000542001 LPCAT4Q643R3 524 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 DNAJC14Q6Y2X3 702 aaPredicted RBP16.42■□□□□ 0.22
VARS2-212ENST00000542001 MIER2Q8N344 545 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 PHACTR1Q9C0D0 580 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 THEGQ9P2T0 379 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 PLLPQ9Y342 182 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 C5orf60A6NFR6 353 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 F9P00740 461 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 C2P06681 752 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 CD52P31358 61 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 NR2C2P49116 596 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 OLFML2BQ68BL8 750 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 PSTKQ8IV42 348 aaKnown RBP16.42■□□□□ 0.22
VARS2-212ENST00000542001 DCBLD1Q8N8Z6 715 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 CNDP1Q96KN2 507 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 FZD8Q9H461 694 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 ST3GAL5Q9UNP4 418 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
VARS2-212ENST00000542001 MAPK10P53779 464 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 OASLQ15646 514 aaKnown RBP16.42■□□□□ 0.22
VARS2-212ENST00000542001 PARP6Q2NL67 630 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 RALGPS1Q5JS13 557 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 WASHC2DQ5SRD0 308 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 MARC1Q5VT66 337 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 ZNF670Q9BS34 389 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 EFCAB1Q9HAE3 211 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 TAS2R1Q9NYW7 299 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 TMEM216Q9P0N5 145 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 PPP2R3BQ9Y5P8 575 aa16.42■□□□□ 0.22
VARS2-212ENST00000542001 MTSS1O43312 755 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 THRAP10827 490 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 C4orf22Q6V702 233 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 TTC30BQ8N4P2 665 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 OR52K2Q8NGK3 314 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 SPATA17Q96L03 361 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 ACE2Q9BYF1 805 aaPredicted RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 ADNPQ9H2P0 1102 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 DONSONQ9NYP3 566 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 DTLQ9NZJ0 730 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 IPPQ9Y573 584 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 STRNO43815 780 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 C22orf31O95567 290 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 MPSTP25325 297 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 TRMT5Q32P41 509 aaKnown RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 SZRD1Q7Z422 152 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 HPS6Q86YV9 775 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 INPP5DQ92835 1189 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 CADM1Q9BY67 442 aaKnown RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 EPB41L4BQ9H329 900 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 ALG9Q9H6U8 611 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 SAR1AQ9NR31 198 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 NMRK1Q9NWW6 199 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 KCNK4Q9NYG8 393 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 COL4A1P02462 1669 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 YJEFN3A6XGL0 299 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 E7ENQ6 273 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 SH3BGRLO75368 114 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 SMPD1P17405 629 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 NFKBIAP25963 317 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 LHX1P48742 406 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 ABCE1P61221 599 aaKnown RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 PHEXP78562 749 aa16.41■□□□□ 0.22
VARS2-212ENST00000542001 MRPS5P82675 430 aaKnown RBP16.41■□□□□ 0.22
VARS2-212ENST00000542001 THEMIS2Q5TEJ8 643 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms