RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DLDP09622 509 aaKnown RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 NPSP0C0P6 89 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 WEE2P0C1S8 567 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 FAM90A15PP0C7V4 464 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 FAM90A14PP0C7W9 464 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 TNNT1P13805 278 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 PRKCHP24723 683 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 THBS4P35443 961 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 ARL3P36405 182 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 POLD2P49005 469 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 DGKQP52824 942 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 TPTEP56180 551 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 HOXA4Q00056 320 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 POU5F1Q01860 360 aaKnown RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 GALNT2Q10471 571 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 CLCA4Q14CN2 919 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 ST3GAL2Q16842 350 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 TMEM196Q5HYL7 178 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 GPATCH4Q5T3I0 446 aaKnown RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 ATF7IPQ6VMQ6 1270 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 Q6ZWC4 215 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 NEK10Q6ZWH5 1172 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 R3HCC1LQ7Z5L2 792 aaKnown RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 RAB11FIP4Q86YS3 637 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 IZUMO1Q8IYV9 350 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 AFAP1Q8N556 730 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 ABHD11Q8NFV4 315 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 ADAMTS15Q8TE58 950 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 SOCS4Q8WXH5 440 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 CUL5Q93034 780 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 REPS1Q96D71 796 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 PIGSQ96S52 555 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 TREX2Q9BQ50 279 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 C17orf80Q9BSJ5 609 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 VN1R3Q9BXE9 311 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 FSD1LQ9BXM9 530 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 CCDC68Q9H2F9 335 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 FSCN3Q9NQT6 498 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 HAUS2Q9NVX0 235 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 FLRT1Q9NZU1 646 aa4.62□□□□□ -1.67
SNHG1-217ENST00000541578 UBE2J1Q9Y385 318 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-217ENST00000541578 VWA3AA6NCI4 1184 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 DNAJC9-AS1A6NH13 148 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SMIM22K7EJ46 135 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 AP3D1O14617 1153 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SPTLC2O15270 562 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 TMCC2O75069 709 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 CELA2AP08217 269 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 KRT20P35900 424 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 CDK7P50613 346 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 DRG2P55039 364 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 EIF4A1P60842 406 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SETQ01105 290 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 TBL3Q12788 808 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SEMA3BQ13214 749 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SRSF7Q16629 238 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 WDR45BQ5MNZ6 344 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 FAM69AQ5T7M9 428 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SLC9C2Q5TAH2 1124 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 ANO7Q6IWH7 933 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 MTHFD1LQ6UB35 978 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 NAPRTQ6XQN6 538 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 ABRAQ8N0Z2 381 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 FAM71DQ8N9W8 422 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 ANKRD52Q8NB46 1076 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SUN3Q8TAQ9 357 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 APOPT1Q96IL0 206 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 EIF2B3Q9NR50 452 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 ALKBH4Q9NXW9 302 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 VPS51Q9UID3 782 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 GPR34Q9UPC5 381 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 CAMK2AQ9UQM7 478 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 DRG1Q9Y295 367 aaKnown RBP4.61□□□□□ -1.67
SNHG1-217ENST00000541578 GDAQ9Y2T3 454 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 SNX14Q9Y5W7 946 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 CYP46A1Q9Y6A2 500 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 MLH3Q9UHC1 1453 aa4.61□□□□□ -1.67
SNHG1-217ENST00000541578 PI4KAP2A4QPH2 592 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 CCER2I3L3R5 266 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 INO80B-WBP1J3KQ70 363 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 TJP3O95049 919 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 ALOX12P18054 663 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 MMP8P22894 467 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 ABCD3P28288 659 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 GRK5P34947 590 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 STAT1P42224 750 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 TUBA4AP68366 448 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 CYP4F2P78329 520 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SEC23BQ15437 767 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 BAK1Q16611 211 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 LY6KQ17RY6 165 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 FAM133BQ5BKY9 247 aaKnown RBP4.6□□□□□ -1.67
SNHG1-217ENST00000541578 RILPL1Q5EBL4 403 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 PRAMEF17Q5VTA0 474 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms