RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 MUC3BQ9H195 1237 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 MAGEH1Q9H213 219 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 MPP6Q9NZW5 540 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 SLC8A2Q9UPR5 921 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ZDBF2Q9HCK1 2354 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ZNF487B1APH4 448 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 TRIM24O15164 1050 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 CNTN5O94779 1100 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 PTMAP06454 111 aaKnown RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 CCDC175P0C221 793 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 RARAP10276 462 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 TIE1P35590 1138 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 GGCXP38435 758 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 SEC13P55735 322 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 GEMIN4P57678 1058 aaKnown RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 ECT2LQ008S8 904 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 MESP2Q0VG99 397 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 ENPP2Q13822 863 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 FSCBQ5H9T9 825 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 RNF219Q5W0B1 726 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 ZNF662Q6ZS27 426 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 Q6ZS52 159 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 RFX8Q6ZV50 586 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 NLRP14Q86W24 1093 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 RHOT1Q8IXI2 618 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 CHPFQ8IZ52 775 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 FAM71BQ8TC56 605 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 WFDC5Q8TCV5 224 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 GABRG3Q99928 467 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 FBRSQ9HAH7 460 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 POLMQ9NP87 494 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 PRMT8Q9NR22 394 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 DDX56Q9NY93 547 aaKnown RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 ZNF212Q9UDV6 495 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 VPS28Q9UK41 221 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 HPCAL4Q9UM19 191 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 REXO2Q9Y3B8 237 aaKnown RBP19.28■□□□□ 0.68
VPS33A-205ENST00000541169 HCN4Q9Y3Q4 1203 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 ADGRG1Q9Y653 693 aa19.28■□□□□ 0.68
VPS33A-205ENST00000541169 CCDC163A0A0D9SF12 145 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 FAM72CH0Y354 149 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 SPOPO43791 374 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ALDH1A2O94788 518 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 KLF8O95600 359 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 IL1R2P27930 398 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 CSKP41240 450 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 NAP1L1P55209 391 aaKnown RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 GNA12Q03113 381 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 SLC20A2Q08357 652 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 KRT81Q14533 505 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 PARP15Q460N3 678 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 FUT11Q495W5 492 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ODF2Q5BJF6 829 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 PPP6R3Q5H9R7 873 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ARTNQ5T4W7 220 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 FAM72AQ5TYM5 149 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 FAM72DQ6L9T8 149 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 TFAP2DQ7Z6R9 452 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 METTL3Q86U44 580 aaKnown RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 FAM72BQ86X60 149 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 CIR1Q86X95 450 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 SYCE1Q8N0S2 351 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 UMODL1-AS1Q8N2C9 162 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 PYROXD2Q8N2H3 581 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 DCAF4L2Q8NA75 395 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ACRBPQ8NEB7 543 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 NEU3Q9UQ49 428 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ARIH1Q9Y4X5 557 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-205ENST00000541169 SNX10Q9Y5X0 201 aa19.27■□□□□ 0.68
VPS33A-205ENST00000541169 ZSCAN5CA6NGD5 496 aaPredicted RBP19.26■□□□□ 0.67
VPS33A-205ENST00000541169 PSTPIP1O43586 416 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 BUB1BO60566 1050 aaPredicted RBP19.26■□□□□ 0.67
VPS33A-205ENST00000541169 RAMP2O60895 175 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 CHRM1P11229 460 aaPredicted RBP19.26■□□□□ 0.67
VPS33A-205ENST00000541169 NDST2P52849 883 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 GAS6Q14393 721 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 STARD3Q14849 445 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 CRY1Q16526 586 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 TMEM215Q68D42 235 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 RETSATQ6NUM9 610 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 SERPINA13PQ6UXR4 307 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 DAAM2Q86T65 1068 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 ALLCQ8N6M5 410 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 TXNDC5Q8NBS9 432 aaKnown RBP19.26■□□□□ 0.67
VPS33A-205ENST00000541169 KCTD6Q8NC69 237 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 TPCN2Q8NHX9 752 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 KIAA1524Q8TCG1 905 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 HSPH1Q92598 858 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 ZNF670Q9BS34 389 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 SUN2Q9UH99 717 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 SLC25A13Q9UJS0 675 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 OR51B4Q9Y5P0 310 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 ALG6Q9Y672 507 aa19.26■□□□□ 0.67
VPS33A-205ENST00000541169 TMEM110-MUSTN1A8MSY1 372 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 SYNCRIPO60506 623 aaKnown RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 SERPINB6P35237 376 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 IRAK1P51617 712 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 CLCN6P51797 869 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms