RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 NCLNQ969V3 563 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SRPK1Q96SB4 655 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FAM167BQ9BTA0 163 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CASS4Q9NQ75 786 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 DNAJC16Q9Y2G8 782 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 A0A096LPK6 155 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 A0A0A0MRY4 1105 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 AXIN1O15169 862 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 KATNA1O75449 491 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 WASP42768 502 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 INTS6LQ5JSJ4 861 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CLEC20AQ6ZU45 233 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ANKS3Q6ZW76 656 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 C11orf96Q7Z7L8 435 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ZCCHC9Q8N567 271 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SPATA13Q96N96 652 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FAM96AQ9H5X1 160 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PIF1Q9H611 641 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 LRRC4CQ9HCJ2 640 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PACSIN3Q9UKS6 424 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PLA2G4CQ9UP65 541 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 NWD2Q9ULI1 1742 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 LZTS3O60299 673 aaPredicted RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FMO4P31512 558 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 VEGFBP49765 207 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SERPINB9P50453 376 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 MGAT5Q09328 741 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CAPRIN1Q14444 709 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FNBP1LQ5T0N5 605 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PRPF39Q86UA1 669 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 TMEM199Q8N511 208 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ARL14EPQ8N8R7 260 aaPredicted RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 OR7D4Q8NG98 312 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 FOXP3Q9BZS1 431 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CHKBQ9Y259 395 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ANP32DO95626 131 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PGM1P36871 562 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PEX5P50542 639 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 BOP1Q14137 746 aaKnown RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TRIM60Q495X7 471 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SYTL3Q4VX76 610 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 MARK2Q7KZI7 788 aaKnown RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 DET1Q7L5Y6 550 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 UNC5BQ8IZJ1 945 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SLAIN1Q8ND83 568 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SNX19Q92543 992 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SPOCK2Q92563 424 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 RUBCNQ92622 972 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 XYLT2Q9H1B5 865 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 CHRAC1Q9NRG0 131 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PIGVQ9NUD9 493 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SYBUQ9NX95 663 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 MRPS23Q9Y3D9 190 aaKnown RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 GSTA4O15217 222 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PDHA1P08559 390 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HMOX2P30519 316 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HOXA11P31270 313 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 COL9A2Q14055 689 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 CBX2Q14781 532 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TIGD7Q6NT04 549 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 MFSD3Q96ES6 412 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 GPR88Q9GZN0 384 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 WWP1Q9H0M0 922 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 VCX3BQ9H321 246 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 OSGEPL1Q9H4B0 414 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 ZDHHC6Q9H6R6 413 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HPS4Q9NQG7 708 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 UXTQ9UBK9 157 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 UBA2Q9UBT2 640 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 BAG5Q9UL15 447 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TCRBV9S1A1TA0A576 114 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 BTNL10A8MVZ5 291 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PER2O15055 1255 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TPST1O60507 370 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 DDHD2O94830 711 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 GLP2RO95838 553 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HIST1H2AGP0C0S8 130 aaPredicted RBP9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HIST1H2ADP20671 130 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 CHRNA4P43681 627 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 FAM83EQ2M2I3 478 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 LRRC38Q5VT99 294 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 MRNIPQ6NTE8 343 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 NLRP9Q7RTR0 991 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 SRLQ86TD4 932 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 MON1AQ86VX9 555 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 LMNTD2Q8IXW0 634 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HIST1H2AHQ96KK5 128 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 TMEM237Q96Q45 408 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 HIST1H2AJQ99878 128 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 H2AFJQ9BTM1 129 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 CIDEBQ9UHD4 219 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms