RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	CEP83	Q9Y592	693 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FHOD1	Q9Y613	1164 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	HS3ST4	Q9Y661	456 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SLCO1B1	Q9Y6L6	691 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PLXNB3	Q9ULL4	1909 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	DOCK9	Q9BZ29	2069 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	DRGX	A6NNA5	263 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475		I6L893	689 aa	Predicted RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475		M0QYT0	321 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SH3BP5	O60239	455 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RNASEH1	O60930	286 aa	Known RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PAGE1	O75459	146 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GRAP2	O75791	330 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	LSM8	O95777	96 aa	Known RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	MZF1	P28698	734 aa	Predicted RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GRIA4	P48058	902 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GALC	P54803	685 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FOXC1	Q12948	553 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	BRMS1L	Q5PSV4	323 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CACUL1	Q86Y37	369 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	DHX40	Q8IX18	779 aa	Known RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	KDF1	Q8NAX2	398 aa	Predicted RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	C18orf8	Q96DM3	657 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FEM1A	Q9BSK4	669 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	MIR1-1HG	Q9H1L0	117 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TM9SF3	Q9HD45	589 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ANLN	Q9NQW6	1124 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PIGV	Q9NUD9	493 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FBXL12	Q9NXK8	326 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SERGEF	Q9UGK8	458 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NCKAP1	Q9Y2A7	1128 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NEUROG3	Q9Y4Z2	214 aa		13.51	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SPAAR	A0A1B0GVQ0	90 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475		F8VZ95	297 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	MID1	O15344	667 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ATP9B	O43861	1147 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CLDN11	O75508	207 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ENDOD1	O94919	500 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CER1	O95813	267 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TOP3B	O95985	862 aa	Known RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	F9	P00740	461 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GOT1	P17174	413 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	C5AR1	P21730	350 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SLC8A1	P32418	973 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SIM1	P81133	766 aa	Predicted RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TRIP6	Q15654	476 aa	Known RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ZNF423	Q2M1K9	1284 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	HLA-B	Q31612	363 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SLC25A52	Q3SY17	297 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	HSP90AA4P	Q58FG1	418 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	KIAA0895L	Q68EN5	471 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	C14orf80	Q86SX3	495 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NOP9	Q86U38	636 aa	Known RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ZNF677	Q86XU0	584 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	XYLT1	Q86Y38	959 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NAXD	Q8IW45	347 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	OR52K2	Q8NGK3	314 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	EPS8L1	Q8TE68	723 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GATA6	Q92908	595 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RPL10L	Q96L21	214 aa	Known RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SCNM1	Q9BWG6	230 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NEUROG2	Q9H2A3	272 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GAN	Q9H2C0	597 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	GAREM1	Q9H706	876 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	IL21R	Q9HBE5	538 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TMEM59L	Q9UK28	342 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PCOLCE2	Q9UKZ9	415 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	VANGL2	Q9ULK5	521 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TPX2	Q9ULW0	747 aa	Known RBP	13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	DAAM1	Q9Y4D1	1078 aa		13.5	□□□□□ -0.25
SEMA4D-223	ENST00000540475	COL5A1	P20908	1838 aa	Predicted RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	IGLV3-10	A0A075B6K4	115 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475		A0A1B0GVT2	93 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475		A0A1W2PPC4	97 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	LRRC10B	A6NIK2	292 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	DKK1	O94907	266 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ADCY5	O95622	1261 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ADH1B	P00325	375 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PDGFRA	P16234	1089 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TFE3	P19532	575 aa	Predicted RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NNMT	P40261	264 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CSNK1E	P49674	416 aa	Known RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	STK19	P49842	368 aa	Predicted RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	IRAK1	P51617	712 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CCR5	P51681	352 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CDH4	P55283	916 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	JAM2	P57087	298 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RACK1	P63244	317 aa	Known RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NOMO3	P69849	1222 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	NME3	Q13232	169 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RAPGEF1	Q13905	1077 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ELAVL3	Q14576	367 aa	Known RBP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	KIF19	Q2TAC6	998 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ERICH1	Q86X53	443 aa		13.49	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CIR1	Q86X95	450 aa	Predicted RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms