RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 A0A096LPK6 155 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 C15orf38-AP3S2A0A0A6YYH1 394 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 IRF6O14896 467 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZBTB14O43829 449 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TSPAN1O60635 241 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CABYRO75952 493 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TNFAIP8O95379 198 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 COL6A2P12110 1019 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 INSRRP14616 1297 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CREB5Q02930 508 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PRKAA1Q13131 559 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 LAMC2Q13753 1193 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PCBP1Q15365 356 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CNGA3Q16281 694 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PPM1JQ5JR12 505 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TCHHL1Q5QJ38 904 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 SEL1L3Q68CR1 1132 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 FSTL4Q6MZW2 842 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TMC7Q7Z402 723 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ARPINQ7Z6K5 226 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF567Q8N184 647 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CCDC185Q8N715 623 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 DRAXINQ8NBI3 349 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CPB2Q96IY4 423 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 VAT1Q99536 393 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 IL22Q9GZX6 179 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF696Q9H7X3 374 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 THEGQ9P2T0 379 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 STAP1Q9ULZ2 295 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 FZD9O00144 591 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 MFSD11O43934 449 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 DAB1O75553 588 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 FBXO21O94952 628 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ERVK-10P10266 1014 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TXNP10599 105 aaKnown RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TFE3P19532 575 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PIK3R1P27986 724 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PSMB4P28070 264 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 NOS2P35228 1153 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CRADDP78560 199 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CDC42EP1Q00587 391 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TREML2Q5T2D2 321 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 VWA5B1Q5TIE3 1220 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 LIPMQ5VYY2 423 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ATG14Q6ZNE5 492 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 BNIPLQ7Z465 357 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 SPATA24Q86W54 205 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CNTD1Q8N815 330 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 OR6B3Q8NGW1 331 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 NT5C3BQ969T7 300 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 DCUN1D1Q96GG9 259 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 PRICKLE1Q96MT3 831 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CASS4Q9NQ75 786 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 ATXN10Q9UBB4 475 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 TRHDEQ9UKU6 1024 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
UBE3B-209ENST00000539584 CREB3O43889 395 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 CLPTM1O96005 669 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 MLH1P40692 756 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 HCAR3P49019 387 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 ERFP50548 548 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 ADGRE1Q14246 886 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 FLOT2Q14254 428 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 KCTD2Q14681 263 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 SLC9B1Q4ZJI4 515 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-209ENST00000539584 PIGGQ5H8A4 983 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 BORAQ6PGQ7 559 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 ZYG11AQ6WRX3 759 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 PID1Q7Z2X4 250 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 EFCAB1Q9HAE3 211 aa13.53□□□□□ -0.24
UBE3B-209ENST00000539584 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 ASB14A6NK59 587 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 E9PBE3 544 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms