RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SGK2Q9HBY8 427 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NLRC4Q9NPP4 1024 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ANO10Q9NW15 660 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FBXL12Q9NXK8 326 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ARHGEF38Q9NXL2 777 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 RRN3Q9NYV6 651 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NCKAP1Q9Y2A7 1128 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ITIH6Q6UXX5 1313 aa19.64■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TARSL2A2RTX5 802 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FAM47DPA6NHR8 397 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 UPK3BL1B0FP48 263 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 UPK3BL2E5RIL1 263 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 I6L893 689 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FLT3P36888 993 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PSMD8P48556 350 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PLK1P53350 603 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NOMO3P69849 1222 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SHC2P98077 582 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 BNC1Q01954 994 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 DEUP1Q05D60 604 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 MTA1Q13330 715 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SND1Q7KZF4 910 aaKnown RBP eCLIP19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 MSANTD4Q8NCY6 345 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PTPRN2Q92932 1015 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NT5C3BQ969T7 300 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 BIRC7Q96CA5 298 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CAMK1GQ96NX5 476 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FAM129BQ96TA1 746 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ZDHHC5Q9C0B5 715 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 IL21RQ9HBE5 538 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TMPRSS4Q9NRS4 437 aa19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NOCTQ9UK39 431 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TPRP12270 2363 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-212ENST00000539372 A0A1B0GVT2 93 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 GJB3O75712 270 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 RNASEH2AO75792 299 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CNTN5O94779 1100 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TOP3BO95985 862 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SPINK2P20155 84 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SLC8A1P32418 973 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SCNN1AP37088 669 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NNMTP40261 264 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CSNK1EP49674 416 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 COPB1P53618 953 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 OXCT1P55809 520 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 JAM2P57087 298 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SULT2A1Q06520 285 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 STX1AQ16623 288 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SLC25A52Q3SY17 297 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 BRMS1LQ5PSV4 323 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TRNP1Q6NT89 227 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 USP30Q70CQ3 517 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PHLDB2Q86SQ0 1253 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ALG14Q96F25 216 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PCMTD1Q96MG8 357 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CFAP57Q96MR6 1250 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 OMDQ99983 421 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FEM1AQ9BSK4 669 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NEUROG2Q9H2A3 272 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SCML1Q9UN30 329 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SIK3Q9Y2K2 1263 aa19.62■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ACACBO00763 2458 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SH3BP5O60239 455 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CLDN11O75508 207 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ZNF18P17022 549 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CHRNB2P17787 502 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SOX5P35711 763 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FAM193AP78312 1265 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SIM1P81133 766 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FMO1Q01740 532 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CDR2Q01850 454 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 MYL5Q02045 173 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SYCP1Q15431 976 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ALFQ53S48 1182 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 LAYNQ6UX15 382 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 PGAP3Q96FM1 320 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 GAREM1Q9H706 876 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 TMEM59LQ9UK28 342 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
TNFRSF1A-212ENST00000539372 F9P00740 461 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 IL1BP01584 269 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 AFF3P51826 1226 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 GALCP54803 685 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CDH4P55283 916 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 HLA-BQ31612 363 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 C5orf22Q49AR2 442 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ACCSLQ4AC99 568 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 CCDC183Q5T5S1 534 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 KIAA0895LQ68EN5 471 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 NCEH1Q6PIU2 408 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 LRSAM1Q6UWE0 723 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ZNF677Q86XU0 584 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ZNF683Q8IZ20 524 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 AADATQ8N5Z0 425 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 EMC1Q8N766 993 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 ANKRD20A12PQ8NF67 263 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SLC30A5Q8TAD4 765 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 FRS2Q8WU20 508 aa19.6■□□□□ 0.73
TNFRSF1A-212ENST00000539372 SPAG5Q96R06 1193 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms