RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 KCNK16Q96T55 309 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 EIF2B3Q9NR50 452 aaKnown RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 TMEM30AQ9NV96 361 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 GDAP2Q9NXN4 497 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 TIMM13Q9Y5L4 95 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 PLXNB2O15031 1838 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 YJEFN3A6XGL0 299 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 MEIS3P2A8K0S8 358 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 DCXO43602 365 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 ZCCHC18P0CG32 403 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 NPR3P17342 541 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 NOS2P35228 1153 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SCNN1AP37088 669 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 TKTL1P51854 596 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 GRIK3Q13003 919 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 FRMD7Q6ZUT3 714 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 GPRIN1Q7Z2K8 1008 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 MAPK15Q8TD08 544 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 NT5C3BQ969T7 300 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 MED10Q9BTT4 135 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 LRRC4Q9HBW1 653 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 CHRAC1Q9NRG0 131 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 NDE1Q9NXR1 346 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 EME2A4GXA9 379 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 PDHXO00330 501 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 ZBTB14O43829 449 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 LTFP02788 710 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SAT1P21673 171 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 COPAP53621 1224 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 CACNA2D1P54289 1103 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 AP2B1P63010 937 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 ZBTB17Q13105 803 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SNAPC2Q13487 334 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 TBCCQ15814 346 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SLC9B1Q4ZJI4 515 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 TCHHL1Q5QJ38 904 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 UBXN11Q5T124 520 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 SIX6OS1Q8N1H7 587 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 RBBP8Q99708 897 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 COG4Q9H9E3 785 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-203ENST00000538596 VANGL2Q9ULK5 521 aa12.24□□□□□ -0.45
CPNE8-203ENST00000538596 GOLGA8QA0A0J9YX86 632 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ZCWPW2A0A1B0GU75 182 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 GOLGA8OA6NCC3 632 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 GOLGA8NF8WBI6 632 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 CD4P01730 458 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 PTPN1P18031 435 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 CD68P34810 354 aaPredicted RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 LBRQ14739 615 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 PAFAH1B3Q15102 231 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 FOXB2Q5VYV0 432 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 HPS6Q86YV9 775 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 SLC26A7Q8TE54 656 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 GATA6Q92908 595 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 WNT8BQ93098 351 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ZNF560Q96MR9 790 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 CPNE1Q99829 537 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 MLPHQ9BV36 600 aaPredicted RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ULBP1Q9BZM6 244 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 IGSF9Q9P2J2 1179 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 A0A096LPK6 155 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 G3V2L1 256 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 TREHO43280 583 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ADRA1BP35368 520 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 AFF1P51825 1210 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 SNX17Q15036 470 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 GPR162Q16538 588 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 BNIPLQ7Z465 357 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 CCNJLQ8IV13 435 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 DEFB107AQ8IZN7 70 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
CPNE8-203ENST00000538596 EDEM1Q92611 657 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 RHOBTB2Q9BYZ6 727 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
CPNE8-203ENST00000538596 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
CPNE8-203ENST00000538596 KLHL2O95198 593 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 CHRNGP07510 517 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 GRK2P25098 689 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 HARS2P49590 506 aaKnown RBP12.22□□□□□ -0.45
CPNE8-203ENST00000538596 PSEN1P49768 467 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 CCNA1P78396 465 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 CDC16Q13042 620 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 CUL3Q13618 768 aa12.22□□□□□ -0.45
CPNE8-203ENST00000538596 CCNIQ14094 377 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms