RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FAM171BQ6P995 826 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TLDC1Q6P9B6 456 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CD300LGQ6UXG3 332 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 KYAT3Q6YP21 454 aaKnown RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 AGMOQ6ZNB7 445 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 PDZD4Q76G19 769 aaPredicted RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 ANKRD33Q7Z3H0 272 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 SERINC5Q86VE9 423 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 FAM72BQ86X60 149 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 STKLD1Q8NE28 680 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 DEPDC1BQ8WUY9 529 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 E2F7Q96AV8 911 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TIFAQ96CG3 184 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 SMARCD1Q96GM5 515 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 GAD1Q99259 594 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TMEM120AQ9BXJ8 343 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 SYBUQ9NX95 663 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 KCNK4Q9NYG8 393 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 HAO1Q9UJM8 370 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 EMCNQ9ULC0 261 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ST3GAL5Q9UNP4 418 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 MAD1L1Q9Y6D9 718 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TANC1Q9C0D5 1861 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ERI2A8K979 691 aaKnown RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 MTSS1O43312 755 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CREB3O43889 395 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CACNG3O60359 315 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 GLRA3O75311 464 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 HAUS5O94927 633 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 AP2A1O95782 977 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 F9P00740 461 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CHRNA1P02708 482 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 PRKCGP05129 697 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CSF2RAP15509 400 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 PCSK1P29120 753 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 CCNG1P51959 295 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TPI1P60174 286 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ZNF33AQ06730 810 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 AP1B1Q10567 949 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 OVGP1Q12889 678 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 KCNA10Q16322 511 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 UPP1Q16831 310 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 INSCQ1MX18 579 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 WASHC2DQ5SRD0 308 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TMEM240Q5SV17 173 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 RNF180Q86T96 592 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TMEM135Q86UB9 458 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 MTDHQ86UE4 582 aaKnown RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 TP53INP2Q8IXH6 220 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 NDUFAF2Q8N183 169 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CCDC33Q8N5R6 958 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 NPWQ8N729 165 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 KLHDC9Q8NEP7 349 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 SLC7A14Q8TBB6 771 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ZSCAN18Q8TBC5 510 aaPredicted RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 CDKL2Q92772 493 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 MYLPFQ96A32 169 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TSGA13Q96PP4 275 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 VAT1Q99536 393 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TBC1D10AQ9BXI6 508 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 IQCGQ9H095 443 aaKnown RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 OSBPL2Q9H1P3 480 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 GBA3Q9H227 469 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ALG13Q9NP73 1137 aaKnown RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 STARD7Q9NQZ5 370 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 PCMTD2Q9NV79 361 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
DDB1-211ENST00000538280 CACNG4Q9UBN1 327 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 HEY2Q9UBP5 337 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 MCM8Q9UJA3 840 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 ADAM28Q9UKQ2 775 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TRHDEQ9UKU6 1024 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 NEU3Q9UQ49 428 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
DDB1-211ENST00000538280 TDRD15B5MCY1 1934 aaKnown RBP9.46□□□□□ -0.89
DDB1-211ENST00000538280 TRANK1O15050 2925 aa9.46□□□□□ -0.89
DDB1-211ENST00000538280 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.46□□□□□ -0.9
DDB1-211ENST00000538280 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.46□□□□□ -0.9
DDB1-211ENST00000538280 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 I3L4J1 428 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 M0QZQ0 153 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 GPR182O15218 404 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 MGEA5O60502 916 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 PLIN3O60664 434 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 PEX11AO75192 247 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 CBX6O95503 412 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 TIMP1P01033 207 aa9.46□□□□□ -0.9
DDB1-211ENST00000538280 ALDOAP04075 364 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms