RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NMBRP28336 390 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PCSK1P29120 753 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 GRK4P32298 578 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CHRNA4P43681 627 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SLC1A6P48664 564 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SLC25A3Q00325 362 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SLC18A2Q05940 514 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SEMA5AQ13591 1074 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 USP10Q14694 798 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PARP6Q2NL67 630 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PREPLQ4J6C6 727 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 KHDC1Q4VXA5 237 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OTUD1Q5VV17 481 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 LRRTM3Q86VH5 581 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 WDR75Q8IWA0 830 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 RYBPQ8N488 228 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PAF1Q8N7H5 531 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MARK4Q96L34 752 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TSNARE1Q96NA8 513 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SLC38A7Q9NVC3 462 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 PDE5AO76074 875 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 BPGMP07738 259 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 DLDP09622 509 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 PGAM1P18669 254 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 WARSP23381 471 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 CCND1P24385 295 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 GARSP41250 739 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 LHX1P48742 406 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 ASRGL1Q7L266 308 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 ATPAF2Q8N5M1 289 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 TEX9Q8N6V9 391 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 GSTCDQ8NEC7 633 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 TRPV1Q8NER1 839 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 CENPIQ92674 756 aaPredicted RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 SMARCD1Q96GM5 515 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 KLHL5Q96PQ7 755 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 PPP1R10Q96QC0 940 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 KCNK13Q9HB14 408 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 SNX15Q9NRS6 342 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 TLK1Q9UKI8 766 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 A0A096LPK6 155 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 CFLARO15519 480 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 ATP5HO75947 161 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 PRKCHP24723 683 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 TSPY1Q01534 308 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 KCNA10Q16322 511 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF280DQ6N043 979 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 ISLR2Q6UXK2 745 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 LDB1Q86U70 411 aaPredicted RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 MCUQ8NE86 351 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 DQX1Q8TE96 717 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 LRMDAQ9H2I8 198 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 NDFIP2Q9NV92 336 aa8.9□□□□□ -0.98
UBE3B-208ENST00000538070 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 APOBEC2Q9Y235 224 aaKnown RBP8.9□□□□□ -0.98
UBE3B-208ENST00000538070 FAM159BA6NKW6 160 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 RALBP11234 206 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 ODC1P11926 461 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 TPSB2P20231 275 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 MSX2P35548 267 aaPredicted RBP8.9□□□□□ -0.99
UBE3B-208ENST00000538070 SERPINB9P50453 376 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 EFEMP1Q12805 493 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 TPSAB1Q15661 275 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 MORN1Q5T089 497 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 FAM219BQ5XKK7 198 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 TAF2Q6P1X5 1199 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 LRRC8BQ6P9F7 803 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 KCNMB4Q86W47 210 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 CIR1Q86X95 450 aaPredicted RBP8.9□□□□□ -0.99
UBE3B-208ENST00000538070 PSTKQ8IV42 348 aaKnown RBP8.9□□□□□ -0.99
UBE3B-208ENST00000538070 DENND6AQ8IWF6 608 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF276Q8N554 614 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 WDR60Q8WVS4 1066 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 FAM193BQ96PV7 902 aaPredicted RBP8.9□□□□□ -0.99
UBE3B-208ENST00000538070 BTBD10Q9BSF8 475 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 CYP4F12Q9HCS2 524 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 TAS2R1Q9NYW7 299 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 C15orf41Q9Y2V0 281 aa8.9□□□□□ -0.99
UBE3B-208ENST00000538070 ANK1P16157 1881 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 SPECC1L-ADORA2AF8WAN1 911 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 PIRTP0C851 137 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 ELF1P32519 619 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 TUBP50607 506 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 PLK1P53350 603 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 PRPSAP1Q14558 356 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 C1orf146Q5VVC0 180 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 MFSD14CQ5VZR4 134 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 FSTL4Q6MZW2 842 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
UBE3B-208ENST00000538070 ATAD1Q8NBU5 361 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms