RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 ZNF473Q8WTR7 871 aaKnown RBP12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 EDAQ92838 391 aa12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 ATP6V1E2Q96A05 226 aa12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 ELSPBP1Q96BH3 223 aa12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 ERP44Q9BS26 406 aa12.55□□□□□ -0.4
TSPAN9-206ENST00000537971 M0QYT0 321 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CASQ2O14958 399 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 KRT7P08729 469 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 ADH5P11766 374 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CSTF1Q05048 431 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 OBP2AQ9NY56 170 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CHUKO15111 745 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 GLI1P08151 1106 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CBWD6Q4V339 395 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CBWD3Q5JTY5 395 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 FAM78AQ5JUQ0 283 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CBWD5Q5RIA9 395 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 C1orf131Q8NDD1 294 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 ZNF606Q8WXB4 792 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 TMEM253P0C7T8 217 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 BMP1P13497 986 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 DRD1P21728 446 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 GPR15P49685 360 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 HIF1AQ16665 826 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 ICE2Q659A1 982 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CRLF3Q8IUI8 442 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 MMGT1Q8N4V1 131 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 SHKBP1Q8TBC3 707 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 MARCOQ9UEW3 520 aaPredicted RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 KRT38O76015 456 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 LILRA6Q6PI73 481 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 SLC44A3Q8N4M1 653 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CCNYL1Q8N7R7 359 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 CCDC124Q96CT7 223 aaKnown RBP12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 USH1CQ9Y6N9 552 aa12.54□□□□□ -0.4
TSPAN9-206ENST00000537971 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 LEFTY2O00292 366 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 HSD17B3P37058 310 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 DGKGP49619 791 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 AP1B1Q10567 949 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 FOXD4Q12950 439 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 WDR75Q8IWA0 830 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 IRGQQ8WZA9 623 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 COL25A1Q9BXS0 654 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 EPN3Q9H201 632 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 CRTAC1Q9NQ79 661 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 RAB6BQ9NRW1 208 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 MEI4A8MW99 385 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PHF2O75151 1096 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 HSPA4LO95757 839 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 KCNN1Q92952 543 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 RMDN2Q96LZ7 410 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 KCNK16Q96T55 309 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 HEBP1Q9NRV9 189 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 UVRAGQ9P2Y5 699 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 IPO11Q9UI26 975 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 LCMT1Q9UIC8 334 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 ZFP69BQ9UJL9 534 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 VPS28Q9UK41 221 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 KANSL1LA0AUZ9 987 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 SMIM24O75264 130 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PDHA1P08559 390 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 SEC13P55735 322 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 IL31Q6EBC2 164 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 PLD4Q96BZ4 506 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 TTC1Q99614 292 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
TSPAN9-206ENST00000537971 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms