RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 GRTP1Q5TC63 336 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 C16orf59Q7L2K0 433 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 PSTKQ8IV42 348 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 CPXM1Q96SM3 734 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ACOX2Q99424 681 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 YIPF2Q9BWQ6 316 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ZNF556Q9HAH1 456 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 PTPRHQ9HD43 1115 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ARMCX1Q9P291 453 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ZNF214Q9UL59 606 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 CACNA1SQ13698 1873 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.776e-8■■■■■ 80.2
GGA3-201ENST00000537686 A8MX80 341 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 HNRNPCL2B2RXH8 293 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 UBDO15205 165 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 UBTFL6P0CB48 400 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 CKBP12277 381 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ALOX15P16050 662 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 NFKB1P19838 968 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 CYP2C18P33260 490 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 MATKP42679 507 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 SLC1A6P48664 564 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 RAP1GDS1P52306 607 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 NAGLUP54802 743 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 PLOD1Q02809 727 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 NFYCQ13952 458 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 BOP1Q14137 746 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 ANKS6Q68DC2 871 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 FBXO39Q8N4B4 442 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 MYLPFQ96A32 169 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 NR1H4Q96RI1 486 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 CD248Q9HCU0 757 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 HPS4Q9NQG7 708 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 XPNPEP1Q9NQW7 623 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 DLGAP2Q9P1A6 1054 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 DPP7Q9UHL4 492 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 BLOC1S6Q9UL45 172 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 MYO5AQ9Y4I1 1855 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 SLX4Q8IY92 1834 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 CCDC88AQ3V6T2 1871 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 COL5A3P25940 1745 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 SMIM28A0A1B0GU29 152 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 NT5C1B-RDH14C9J2C7 533 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 TRDMT1O14717 391 aaKnown RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 ATP6V1B1P15313 513 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 ZNF7P17097 686 aaPredicted RBP10.26□□□□□ -0.77
GGA3-201ENST00000537686 ATP4AP20648 1035 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 PPP4R4Q6NUP7 873 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 UNC5AQ6ZN44 842 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 TPGS1Q6ZTW0 290 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 TRIM48Q8IWZ4 208 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 JADE3Q92613 823 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 DCLRE1BQ9H816 532 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 NMRAL1Q9HBL8 299 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 TAGLN3Q9UI15 199 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 TEKT2Q9UIF3 430 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 FAM50BQ9Y247 325 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 DTNAQ9Y4J8 743 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 SNX13Q9Y5W8 968 aa10.26□□□□□ -0.77
GGA3-201ENST00000537686 FAM95CA0A1B0GW59 222 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 F8W810 466 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 GPR25O00155 361 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 PTPN4P29074 926 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 FLT3P36888 993 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CAMK2GQ13555 558 aaPredicted RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 STARD3Q14849 445 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ATP6AP1LQ52LC2 224 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TTMPQ5BVD1 217 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TMEM154Q6P9G4 183 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 SLC22A9Q8IVM8 553 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 DEFB107AQ8IZN7 70 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ALLCQ8N6M5 410 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CPNE1Q99829 537 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TBL1YQ9BQ87 522 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ZNF670Q9BS34 389 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TM6SF2Q9BZW4 377 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 IL22Q9GZX6 179 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CAAP1Q9H8G2 361 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 NMRK1Q9NWW6 199 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TUBGCP4Q9UGJ1 667 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 SUFUQ9UMX1 484 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 C16orf96A6NNT2 1141 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 CHADO15335 359 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 TREHO43280 583 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 DCXO43602 365 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ALBP02768 609 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 MPOP05164 745 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 ELNP15502 786 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 HDCP19113 662 aa10.25□□□□□ -0.77
GGA3-201ENST00000537686 RPL9P32969 192 aaKnown RBP10.25□□□□□ -0.77
GGA3-201ENST00000537686 SERPINH1P50454 418 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms