RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 MTA1Q13330 715 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 C5orf22Q49AR2 442 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 BRMS1LQ5PSV4 323 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 RABGAP1LQ5R372 815 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 STPG1Q5TH74 334 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TTC39BQ5VTQ0 682 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 E4F1Q66K89 784 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CXorf57Q6NSI4 855 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ARCQ7LC44 396 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 C14orf80Q86SX3 495 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLC30A5Q8TAD4 765 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TOE1Q96GM8 510 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ZNF419Q96HQ0 510 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HSPA12BQ96MM6 686 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 RPRD1AQ96P16 312 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DNAJC7Q99615 494 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 EDEM2Q9BV94 578 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TKTL2Q9H0I9 626 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MTG2Q9H4K7 406 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 WDCPQ9H6R7 721 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ABHD10Q9NUJ1 306 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IMPACTQ9P2X3 320 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IGLV3-19P01714 112 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FOXK2Q01167 660 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DEUP1Q05D60 604 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PTP4A2Q12974 167 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TDRD12Q587J7 1177 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TRIM61Q5EBN2 209 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TRIM72Q6ZMU5 477 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SPC24Q8NBT2 197 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CFAP57Q96MR6 1250 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 AGPAT1Q99943 283 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 C11orf70Q9BRQ4 267 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SIK2Q9H0K1 926 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HAUS4Q9H6D7 363 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 METTL5Q9NRN9 209 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TMPRSS4Q9NRS4 437 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 EVLQ9UI08 416 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ERVW-1Q9UQF0 538 aa18.41■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MED19A0JLT2 244 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TM4SF5O14894 197 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 NDUFS2O75306 463 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MOCS3O95396 460 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 F9P00740 461 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SERPING1P05155 500 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PDGFRAP16234 1089 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MZF1P28698 734 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HNRNPH3P31942 346 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 NUMBP49757 651 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ARID5BQ14865 1188 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ZNF683Q8IZ20 524 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 EMC1Q8N766 993 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 KDM1BQ8NB78 822 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 OR52K2Q8NGK3 314 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FBRSQ9HAH7 460 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SEPT11Q9NVA2 429 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SUN2Q9UH99 717 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DOCK9Q9BZ29 2069 aa18.4■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SRPRAP08240 638 aaKnown RBP18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ACADMP11310 421 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SKILP12757 684 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TNFAIP3P21580 790 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HOXD12P35452 270 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DPP6P42658 865 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PLK1P53350 603 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ST8SIA6P61647 398 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ECT2LQ008S8 904 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLC12A1Q13621 1099 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HNRNPA1L2Q32P51 320 aaKnown RBP18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ARTNQ5T4W7 220 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLC23A3Q6PIS1 610 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SND1Q7KZF4 910 aaKnown RBP eCLIP18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PHLDB2Q86SQ0 1253 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 VPS36Q86VN1 386 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ALG14Q96F25 216 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 GPR174Q9BXC1 333 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLCO3A1Q9UIG8 710 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SNX10Q9Y5X0 201 aa18.39■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TP53BP1Q12888 1972 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CDX4O14627 284 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SIN3BO75182 1162 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CNTN5O94779 1100 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 GJB6O95452 261 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RPS14P62263 151 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CLEC16AQ2KHT3 1053 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RAB6CQ53S08 254 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 HGSNATQ68CP4 663 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 JOSD2Q8TAC2 188 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RPL10LQ96L21 214 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RAB6CQ9H0N0 254 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PAXBP1Q9Y5B6 917 aa18.39■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CABIN1Q9Y6J0 2220 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 CLDN11O75508 207 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 ENDOD1O94919 500 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 OXTRP30559 389 aa18.38■□□□□ 0.53
TNFRSF1A-209ENST00000536717 RDXP35241 583 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms