RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KIFC1Q9BW19 673 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 FRMD8Q9BZ67 464 aaPredicted RBP3.81□□□□□ -1.8
MCF2-210ENST00000536274 GCOM2Q9BZD3 368 aaPredicted RBP3.81□□□□□ -1.8
MCF2-210ENST00000536274 HIPK3Q9H422 1215 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 RUBCNLQ9H714 662 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 GBA2Q9HCG7 927 aaPredicted RBP3.81□□□□□ -1.8
MCF2-210ENST00000536274 WASH6PQ9NQA3 447 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 C8orf4Q9NR00 106 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 CNNM1Q9NRU3 951 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 RIC8BQ9NVN3 520 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 THEGQ9P2T0 379 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 KCNN3Q9UGI6 736 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 IP6K2Q9UHH9 426 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 CYB5R1Q9UHQ9 305 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 ABT1Q9ULW3 272 aaKnown RBP3.81□□□□□ -1.8
MCF2-210ENST00000536274 RNF112Q9ULX5 631 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 SOX13Q9UN79 622 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 MTO1Q9Y2Z2 717 aaKnown RBP3.81□□□□□ -1.8
MCF2-210ENST00000536274 MFHAS1Q9Y4C4 1052 aa3.81□□□□□ -1.8
MCF2-210ENST00000536274 A0A1W2PQ72 361 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SMCO2A6NFE2 343 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 INO80B-WBP1J3KQ70 363 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 NUPL2O15504 423 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 LPXNO60711 386 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 KCNK2O95069 426 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ALX3O95076 343 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 H6PDO95479 791 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PRLP01236 227 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 AMHP03971 560 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 F7P08709 466 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 MCF2P10911 925 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CD46P15529 392 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PRDX6P30041 224 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SLC26A2P50443 739 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PRKAA2P54646 552 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MLLT6P55198 1093 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 DSTNP60981 165 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MRPS15P82914 257 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 TMPRSS15P98073 1019 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 NFATC3Q12968 1075 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DRAP1Q14919 205 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 SPCS2Q15005 226 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PLCL1Q15111 1095 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MAPRE1Q15691 268 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 CCNG2Q16589 344 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MOGQ16653 247 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 C21orf62-AS1Q17RA5 79 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 LDLRAD1Q5T700 205 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SEL1L2Q5TEA6 688 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TMEM236Q5W0B7 351 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SPRYD7Q5W111 196 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DPY19L2P1Q6NXN4 242 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BORAQ6PGQ7 559 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DPH6Q7L8W6 267 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GSTA5Q7RTV2 222 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ERMP1Q7Z2K6 904 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TICAM1Q8IUC6 712 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 APOBEC3FQ8IUX4 373 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 SCUBE3Q8IX30 993 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SYCE1Q8N0S2 351 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 LCORLQ8N3X6 602 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 LARGE2Q8N3Y3 721 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CELF2-AS1Q8N7Q2 184 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SNX31Q8N9S9 440 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BHLHE22Q8NFJ8 381 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 TFB1MQ8WVM0 346 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 EFHD2Q96C19 240 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 ACSF2Q96CM8 615 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 RMND5BQ96G75 393 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 FBXL20Q96IG2 436 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ZBED3Q96IU2 234 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 RPL10LQ96L21 214 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 CCDC77Q9BR77 488 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MCMBPQ9BTE3 642 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 NPLQ9BXD5 320 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 MUC3BQ9H195 1237 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SP140LQ9H930 580 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CYP26B1Q9NR63 512 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ABCB10Q9NRK6 738 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BLOC1S4Q9NUP1 217 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 COMMD8Q9NX08 183 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PARP2Q9UGN5 583 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PCSK1NQ9UHG2 260 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GNPTGQ9UJJ9 305 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RIMKLBQ9ULI2 386 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SCAF8Q9UPN6 1271 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 SLC8A2Q9UPR5 921 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 A0A0B4J203 849 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CCDC162PA2VCL2 907 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FAM149AA5PLN7 773 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MANSC4A6NHS7 340 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 SAC3D1A6NKF1 404 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 KPNA4O00629 521 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 CASQ2O14958 399 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 PRPF4O43172 522 aaKnown RBP eCLIP3.8□□□□□ -1.8
MCF2-210ENST00000536274 NOL3O60936 208 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 KRT5P13647 590 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ITGB6P18564 788 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 UQCRC1P31930 480 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 S100A5P33763 92 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms