RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MFHAS1Q9Y4C4 1052 aa14.42□□□□□ -0.1
VPS11-205ENST00000534551 HYOU1Q9Y4L1 999 aa14.42□□□□□ -0.1
VPS11-205ENST00000534551 PCDHA13Q9Y5I0 950 aa14.42□□□□□ -0.1
VPS11-205ENST00000534551 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 A0A1W2PQF6 199 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 TCRBV21S2A2A0A5A6 115 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 DESP17661 470 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 NTSR1P30989 418 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 CYLC1P35663 651 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 ACVRL1P37023 503 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 SSR1P43307 286 aaKnown RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 NRG1Q02297 640 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 MTA1Q13330 715 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 ZNF177Q13360 481 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 MESDQ14696 234 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 EIF4HQ15056 248 aaKnown RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 CRY1Q16526 586 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 FNDC3BQ53EP0 1204 aaKnown RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 PPP6R3Q5H9R7 873 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 SERPINA13PQ6UXR4 307 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 LRRC31Q6UY01 552 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 TSTD1Q8NFU3 115 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 RPL10LQ96L21 214 aaKnown RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 MRGPRX3Q96LB0 322 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 GABRG3Q99928 467 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 TPSD1Q9BZJ3 242 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 MUC3BQ9H195 1237 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 CD248Q9HCU0 757 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.41□□□□□ -0.1
VPS11-205ENST00000534551 TRIM10Q9UDY6 481 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 DNAI1Q9UI46 699 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 SALL4Q9UJQ4 1053 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 OR51B4Q9Y5P0 310 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 ACTL7AQ9Y615 435 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 EPN1Q9Y6I3 576 aaPredicted RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 NUMA1Q14980 2115 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 ANKRD36A6QL64 1941 aa14.41□□□□□ -0.1
VPS11-205ENST00000534551 TNRC6BQ9UPQ9 1833 aaKnown RBP14.41□□□□□ -0.1
VPS11-205ENST00000534551 THADAQ6YHU6 1953 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 EIF3CLB5ME19 914 aaKnown RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 MYO1FO00160 1098 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 ATG13O75143 517 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 CLDN11O75508 207 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 PROSCO94903 275 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 CD48P09326 243 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 VAV1P15498 845 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 GOT1P17174 413 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 POLR2EP19388 210 aaKnown RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 EPHB2P29323 1055 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 OR1E1P30953 314 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 L1CAMP32004 1257 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 PTPN5P54829 565 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 TPI1P60174 286 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 PIGHQ14442 188 aaPredicted RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 EOGTQ5NDL2 527 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 NUDT18Q6ZVK8 323 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 TMTC1Q8IUR5 882 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 CCDC117Q8IWD4 279 aaPredicted RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 CCDC170Q8IYT3 715 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 EIF3CQ99613 913 aaKnown RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 EPAS1Q99814 870 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
VPS11-205ENST00000534551 VPS28Q9UK41 221 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 FBXO4Q9UKT5 387 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 TBC1D30Q9Y2I9 924 aa14.4□□□□□ -0.1
VPS11-205ENST00000534551 MTA2O94776 668 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 APBB3O95704 486 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 DLDP09622 509 aaKnown RBP14.39□□□□□ -0.11
VPS11-205ENST00000534551 RARAP10276 462 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 RHOQP17081 205 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 PCK1P35558 622 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 NUBP1P53384 320 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 AIF1P55008 147 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 NHLH1Q02575 133 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 MMRN1Q13201 1228 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ENPP2Q13822 863 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 SPA17Q15506 151 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ATP13A4Q4VNC1 1196 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ERMARDQ5T6L9 678 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 LINGO4Q6UY18 593 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 TRMT11Q7Z4G4 463 aaKnown RBP14.39□□□□□ -0.11
VPS11-205ENST00000534551 RTL3Q8N8U3 475 aaKnown RBP14.39□□□□□ -0.11
VPS11-205ENST00000534551 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 NELL1Q92832 810 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ATOH1Q92858 354 aaPredicted RBP14.39□□□□□ -0.11
VPS11-205ENST00000534551 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 FEM1AQ9BSK4 669 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 TMEM245Q9H330 911 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 NOL6Q9H6R4 1146 aaKnown RBP14.39□□□□□ -0.11
VPS11-205ENST00000534551 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 VPS51Q9UID3 782 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 INVSQ9Y283 1065 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 ABCA7Q8IZY2 2146 aa14.39□□□□□ -0.11
VPS11-205ENST00000534551 FRYLO94915 3013 aa14.38□□□□□ -0.11
VPS11-205ENST00000534551 TTC34A8MYJ7 566 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms