RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZMAT2Q96NC0 199 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 PLEKHG4BQ96PX9 1271 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 PPP1R10Q96QC0 940 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 RIT2Q99578 217 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TACO1Q9BSH4 297 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TRIM8Q9BZR9 551 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SLKQ9H2G2 1235 aaPredicted RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 C12orf65Q9H3J6 166 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 PDZD7Q9H5P4 517 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ECT2Q9H8V3 914 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CD93Q9NPY3 652 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 THG1LQ9NWX6 298 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ACTR10Q9NZ32 417 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 RCAN3Q9UKA8 241 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TBX20Q9UMR3 447 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 BTBD3Q9Y2F9 522 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 R3HCC1Q9Y3T6 440 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 YIPF1Q9Y548 306 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 WNT6Q9Y6F9 365 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 LRBAP50851 2863 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 LRRK2Q5S007 2527 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 H7C4K7 107 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 AGRPO00253 132 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CBX4O00257 560 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CAPN9O14815 690 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TRIM24O15164 1050 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ASAP2O43150 1006 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC37A4O43826 429 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC28A2O43868 658 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SUSD5O60279 629 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CDC14BO60729 498 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PPFIA2O75334 1257 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SLITRK3O94933 977 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KLF8O95600 359 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KNG1P01042 644 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 IGHDP01880 384 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 COL6A2P12110 1019 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 FAHP16930 419 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 DRD1P21728 446 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 YWHABP31946 246 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SFNP31947 248 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 QARSP47897 775 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 MCM2P49736 904 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 GUCY2FP51841 1108 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 GFRA1P56159 465 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 DGCR2P98153 550 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SETQ01105 290 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CYP4A11Q02928 519 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF33AQ06730 810 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SPAG1Q07617 926 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 NCBP1Q09161 790 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KARSQ15046 597 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CRY1Q16526 586 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PLEKHG6Q3KR16 790 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 Q4G0T1 1027 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PRAMEF14Q5SWL7 426 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ARHGAP40Q5TG30 622 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 AGBL4Q5VU57 503 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SDHAF4Q5VUM1 108 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TPGS2Q68CL5 300 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CENPPQ6IPU0 288 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PDXDC1Q6P996 788 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 C1orf228Q6PIY5 440 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 DHRS13Q6UX07 377 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 USP53Q70EK8 1073 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TPH2Q8IWU9 490 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 REXO1L1PQ8IX06 675 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 HACE1Q8IYU2 909 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CMTM8Q8IZV2 173 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 FUKQ8N0W3 1084 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TRIML1Q8N9V2 468 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ETNPPLQ8TBG4 499 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TBCKQ8TEA7 893 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PIGOQ8TEQ8 1089 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KCTD13Q8WZ19 329 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CD101Q93033 1021 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CCDC51Q96ER9 411 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 NEIL1Q96FI4 390 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 MSANTD3Q96H12 275 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CNOT6LQ96LI5 555 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ACAP3Q96P50 834 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 OR14A2Q96R54 314 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC22A12Q96S37 553 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 JPH2Q9BR39 696 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KIFC3Q9BVG8 833 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 GPR88Q9GZN0 384 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ZMYND12Q9H0C1 365 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 POLR3FQ9H1D9 316 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 TASP1Q9H6P5 420 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CPNE5Q9HCH3 593 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 DUS2Q9NX74 493 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 VPS54Q9P1Q0 977 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 BCCIPQ9P287 314 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 DKK4Q9UBT3 224 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 AFF4Q9UHB7 1163 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 IL17BQ9UHF5 180 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 NAP1L2Q9ULW6 460 aaPredicted RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms