RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 A0A096LPK6 155 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 RGSL1A5PLK6 1076 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 CAPN8A6NHC0 703 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 PPEF2O14830 753 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 ETS2P15036 469 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 PAFAH1B3Q15102 231 aaKnown RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 CES3Q6UWW8 571 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 STRA8Q7Z7C7 330 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 SETD3Q86TU7 594 aaPredicted RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 TMEM135Q86UB9 458 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 CPSF7Q8N684 471 aaKnown RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 LRRC52Q8N7C0 313 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 RNF139Q8WU17 664 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 ZNF669Q96BR6 464 aaPredicted RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 OPTNQ96CV9 577 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 PRICKLE1Q96MT3 831 aaPredicted RBP16.98■□□□□ 0.31
CTSB-228ENST00000533455 GCNAQ96QF7 691 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 AKT3Q9Y243 479 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
CTSB-228ENST00000533455 MATN2O00339 956 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 CNMDO75829 334 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 LCP1P13796 627 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 ADSLP30566 484 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 RGS2P41220 211 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 MATKP42679 507 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 CSE1LP55060 971 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RARS2Q5T160 578 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 TICAM1Q8IUC6 712 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 KYQ8NBH2 561 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RP9Q8TA86 221 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 HSFY1Q96LI6 401 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 LPIN3Q9BQK8 851 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 MCMBPQ9BTE3 642 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 GATA5Q9BWX5 397 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 CEP41Q9BYV8 373 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 R3HDMLQ9H3Y0 253 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PLEKHA5Q9HAU0 1116 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 BCAP29Q9UHQ4 241 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RAP2CQ9Y3L5 183 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 ZCWPW2A0A1B0GU75 182 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 E2F8A0AVK6 867 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 DNAJA2O60884 412 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 APOA4P06727 396 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PGK2P07205 417 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RPL5P46777 297 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 SULT1E1P49888 294 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 CSRP3P50461 194 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 NUDT2P50583 147 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PRKAA2P54646 552 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 HERC3Q15034 1050 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 SMAD1Q15797 465 aaKnown RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 SLC25A52Q3SY17 297 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PIGGQ5H8A4 983 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 FAM131BQ86XD5 332 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 SNX32Q86XE0 403 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 EGFL6Q8IUX8 553 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 OR52K1Q8NGK4 314 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 OR6B3Q8NGW1 331 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RDH11Q8TC12 318 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 ILKAPQ9H0C8 392 aaPredicted RBP16.97■□□□□ 0.31
CTSB-228ENST00000533455 PRDM12Q9H4Q4 367 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 NMRAL1Q9HBL8 299 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 OXSMQ9NWU1 459 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 PTTG2Q9NZH5 202 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 SEPT10Q9P0V9 454 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 RIMS3Q9UJD0 308 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 TSC2P49815 1807 aa16.97■□□□□ 0.31
CTSB-228ENST00000533455 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 HDAC3O15379 428 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 TIMM44O43615 452 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 DAB1O75553 588 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 CAPN15O75808 1086 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 AP2A1O95782 977 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 SLC25A27O95847 323 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 VTNP04004 478 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 CAPNS1P04632 268 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 TXNP10599 105 aaKnown RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 SERPINB5P36952 375 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 IRF9Q00978 393 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 MAP7Q14244 749 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 DCAF4L1Q3SXM0 396 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 OTUD1Q5VV17 481 aaPredicted RBP16.96■□□□□ 0.31
CTSB-228ENST00000533455 BNIPLQ7Z465 357 aa16.96■□□□□ 0.31
CTSB-228ENST00000533455 DSELQ8IZU8 1212 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms