RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DET1Q7L5Y6 550 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 PHF21BQ96EK2 531 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 MRPL45Q9BRJ2 306 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHA9-202ENST00000532602 BTBD7Q9P203 1132 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 MRPS23Q9Y3D9 190 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ 0
PCDHA9-202ENST00000532602 RNF103O00237 685 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 GUCY1B2O75343 617 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 CTSEP14091 401 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 BRCC3P46736 316 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 ITGA7Q13683 1181 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 PAPD7Q5XG87 772 aaKnown RBP15.05■□□□□ 0
PCDHA9-202ENST00000532602 PPTC7Q8NI37 304 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 FBXO25Q8TCJ0 367 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 RSPH1Q8WYR4 309 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 WNT8BQ93098 351 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 C18orf25Q96B23 403 aaPredicted RBP15.05■□□□□ 0
PCDHA9-202ENST00000532602 A0A0U1RQJ8 604 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 A0A1B0GW55 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 PDE2AO00408 941 aaPredicted RBP15.05■□□□□ 0
PCDHA9-202ENST00000532602 MT-CO1P00395 513 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 GLI1P08151 1106 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L2P0CJ85 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L3P0CJ86 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L4P0CJ87 422 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L5P0CJ88 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L6P0CJ89 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4L7P0CJ90 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 UBE3AQ05086 875 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 KLC1Q07866 573 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 BNC2Q6ZN30 1099 aaPredicted RBP15.05■□□□□ 0
PCDHA9-202ENST00000532602 KCNMB4Q86W47 210 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 VMP1Q96GC9 406 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 HSFY1Q96LI6 401 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 ZC4H2Q9NQZ6 224 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 DUX4Q9UBX2 424 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 CDH9Q9ULB4 789 aa15.05■□□□□ 0
PCDHA9-202ENST00000532602 PCYT1AP49585 367 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 ANKRD23Q86SG2 305 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 RGL4Q8IZJ4 473 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 ZNF655Q8N720 491 aaPredicted RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 SPATA20Q8TB22 786 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 DPY30Q9C005 99 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 HEY2Q9UBP5 337 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 ZSCAN5DPP0CG00 497 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 PWP1Q13610 501 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 PKN2Q16513 984 aaKnown RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 CCDC153Q494R4 210 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 STARD8Q92502 1023 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 PIF1Q9H611 641 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 DNAJC16Q9Y2G8 782 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 CRYL1Q9Y2S2 319 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 CATP04040 527 aaKnown RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 TARSP26639 723 aaKnown RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 NAB1Q13506 487 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 OMDQ99983 421 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 DDX28Q9NUL7 540 aaKnown RBP15.05■□□□□ -0
PCDHA9-202ENST00000532602 NDOR1Q9UHB4 597 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 PEAK1Q9H792 1746 aa15.05■□□□□ -0
PCDHA9-202ENST00000532602 C1QTNF3-AMACRE9PGA6 284 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ZBTB14O43829 449 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 TPST1O60507 370 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 SNRPD1P62314 119 aaKnown RBP15.04■□□□□ -0
PCDHA9-202ENST00000532602 CCDC142Q17RM4 750 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 DNAJC19Q96DA6 116 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 HIPK3Q9H422 1215 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 DNMT3LQ9UJW3 386 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 RAB23Q9ULC3 237 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 UBDO15205 165 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 TREHO43280 583 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ZNF23P17027 643 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 NPR3P17342 541 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 RPL9P32969 192 aaKnown RBP15.04■□□□□ -0
PCDHA9-202ENST00000532602 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.04■□□□□ -0
PCDHA9-202ENST00000532602 C16orf72Q14CZ0 275 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 USP41Q3LFD5 358 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 GPR20Q99678 358 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 RNPEPQ9H4A4 650 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 TBL1XO60907 577 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 RARAP10276 462 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 SLC2A4P14672 509 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 WDR93Q6P2C0 686 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 LRRC34Q8IZ02 419 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 OR56A4Q8NGH8 313 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 CAPNS2Q96L46 248 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 QRFPRQ96P65 431 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 TSPAN18Q96SJ8 248 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 CAB39Q9Y376 341 aaPredicted RBP15.04■□□□□ -0
PCDHA9-202ENST00000532602 BGNP21810 368 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 RBL1P28749 1068 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ALDH9A1P49189 494 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 GNA13Q14344 377 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 ZNF470Q6ECI4 717 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 KCNT2Q6UVM3 1135 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 DNAJC9Q8WXX5 260 aa15.04■□□□□ -0
PCDHA9-202ENST00000532602 NFAT5O94916 1531 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms