RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 M0QYT0 321 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 OPHN1O60890 802 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PAGE1O75459 146 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 SRPRAP08240 638 aaKnown RBP19.53■□□□□ 0.72
SSH3-209ENST00000532600 SYPP08247 313 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 MMEP08473 750 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 VAV1P15498 845 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PDGFRAP16234 1089 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PLK1P53350 603 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 ATXN3P54252 364 aaPredicted RBP19.53■□□□□ 0.72
SSH3-209ENST00000532600 ECT2LQ008S8 904 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 UBXN1Q04323 297 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 C5orf22Q49AR2 442 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 FKBP15Q5T1M5 1219 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 ZNF683Q8IZ20 524 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 TMEM35BQ8NCS4 154 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 EPS8L1Q8TE68 723 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 SLC20A1Q8WUM9 679 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PTPRN2Q92932 1015 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 ERGIC2Q96RQ1 377 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PCED1AQ9H1Q7 454 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 PABPC3Q9H361 631 aaKnown RBP19.53■□□□□ 0.72
SSH3-209ENST00000532600 IL21RQ9HBE5 538 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 TMPRSS4Q9NRS4 437 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 SLC12A6Q9UHW9 1150 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 NOCTQ9UK39 431 aaKnown RBP19.53■□□□□ 0.72
SSH3-209ENST00000532600 VANGL2Q9ULK5 521 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.53■□□□□ 0.72
SSH3-209ENST00000532600 OR51B4Q9Y5P0 310 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 SNX10Q9Y5X0 201 aa19.53■□□□□ 0.72
SSH3-209ENST00000532600 AKAP13Q12802 2813 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 A0A1B0GVM2 712 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 SPAARA0A1B0GVQ0 90 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 TCAF2A6NFQ2 919 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 BCAT2O15382 392 aaPredicted RBP19.52■□□□□ 0.72
SSH3-209ENST00000532600 SEMA4FO95754 770 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 DNTTP04053 509 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 TPM2P07951 284 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 GNSP15586 552 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 SPINK2P20155 84 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 CXCR3P49682 368 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 RNASE9P60153 205 aaKnown RBP19.52■□□□□ 0.72
SSH3-209ENST00000532600 ST8SIA6P61647 398 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 NOMO3P69849 1222 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 NR1I3Q14994 352 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 BNIPLQ7Z465 357 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 ZDHHC17Q8IUH5 632 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 FRS2Q8WU20 508 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 RNF34Q969K3 372 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 BIRC7Q96CA5 298 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 CAMK1GQ96NX5 476 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 BTBD1Q9H0C5 482 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 SYNCQ9H7C4 482 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 ARHGEF38Q9NXL2 777 aa19.52■□□□□ 0.72
SSH3-209ENST00000532600 MID1O15344 667 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 CNTN5O94779 1100 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 IGHV4-34P06331 123 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 CHRNB2P17787 502 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 FLT3P36888 993 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 JAM2P57087 298 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 TPM4P67936 248 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 FOXC1Q12948 553 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 RABGAP1LQ5R372 815 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 TTC39BQ5VTQ0 682 aaPredicted RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 MMAAQ8IVH4 418 aaKnown RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 CCDC117Q8IWD4 279 aaPredicted RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 HDDC3Q8N4P3 179 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 AADATQ8N5Z0 425 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 C18orf8Q96DM3 657 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 PGAP3Q96FM1 320 aaPredicted RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 RPRD1AQ96P16 312 aaPredicted RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 TBCBQ99426 244 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 FAM207AQ9NSI2 230 aaPredicted RBP19.51■□□□□ 0.71
SSH3-209ENST00000532600 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSH3-209ENST00000532600 TMEM59LQ9UK28 342 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 CEP83Q9Y592 693 aa19.51■□□□□ 0.71
SSH3-209ENST00000532600 PLXNA2O75051 1894 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 EDDM13A0A1B0GTR0 161 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 A0A1B0GVT2 93 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 TARSL2A2RTX5 802 aaKnown RBP19.5■□□□□ 0.71
SSH3-209ENST00000532600 MOCS3O95396 460 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 LSM8O95777 96 aaKnown RBP19.5■□□□□ 0.71
SSH3-209ENST00000532600 SERPINC1P01008 464 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 SCNN1AP37088 669 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 SULT1E1P49888 294 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 METAP1P53582 386 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 SNX16P57768 344 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 SLC12A1Q13621 1099 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 CST6Q15828 149 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 RAB6CQ53S08 254 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 ALFQ53S48 1182 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 FAM102AQ5T9C2 384 aaPredicted RBP19.5■□□□□ 0.71
SSH3-209ENST00000532600 NAA35Q5VZE5 725 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 LAYNQ6UX15 382 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 USP30Q70CQ3 517 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 ERICH1Q86X53 443 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 FEM1AQ9BSK4 669 aa19.5■□□□□ 0.71
SSH3-209ENST00000532600 TKTL2Q9H0I9 626 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms